Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2798 ATGGAAACCTATCTTggtgaggaagaagagaaagagatgaTGAGGGAGGAGGAAGATATGGAAATAGAGGAGCAAGTGTTTGTTGCTCACGAGATTGACTTGGATTACGAGTTCGATGCCGGTCGATTCTTCGATTTCAGTGCACAAGAGACTCCTGCTCAAGCTCGCCAAGCCGAACTCTGGTTTCAATCCGCCGGGAGCTACCCTCCTTCTCCTTTTGTGGCGAAGCTAGTGGTGAGAGAGGACGACGTTAGCGCCTCTTCAGAATCAGAGCGTCCGGAATGCGCAACCGCCGTTCACGGCGCCAAGTCTATTGTTCCGTCGGGGATTGGATTTTCCCGCATCGTTTTTCACCATGATGGCTCAAAAGGAGGGGGTGGGAGTGGGAACATTTCTGCCTTGCTGAGTGGAGTTCCGCGGGATGTTAATATGCAACTGTTACAAGTAACTACAGGACTGACCTTTAGCAGTAAGACAATCAGTGGCAATTTGAATTCTAAGGTTAAATCTGCTGTGATGAAGTGTTCAACACTAATGAAACCTACTGCTAGTCAGTTGGCTAAGCTAAATCAGCCCCCTCAAATTGTTAGCGCAAGGTTTCAGAAAGTACAAgatcataacaaaaaaatgaatttatctaCCTCTTCTGGGATAGAGTGTCAAGCTGCCAAACGGCAGAAATTAGAAGGTGGTCTATTGCACAAGGTTGGTGATGTGAAGCAGCAAGTTAATTTTGTCCACAAGGCACCTAAGAAGGTTGCAACTGTTGATCAAAATTCTGGACATTCTAAGCTGAAGATTACTATTCCTAGAGAGCCTGACCTAGAAACTGCTCACAGAGCACAAAGGATTAGACCCAAAAATGCTTCGGAGGTAGAAGTTGTGACAGTGACTGCCCCCAGATTCAAAGCACGCCCGTTAAACAGAAAAATTCTAAATGCTCCTTTGTTACCACTTTCCAAGAGGAGCACTCCACGATTGCCAGAATTTCAAGAATTTCATCTCAAGACACAAGAGAGGGCCATGCAGCATTCATCCGCAACTTCATCATCTTCACTTCATTGCAATGATTCTAACAAGGATTTGGACAAACATACTGCTGTTTCTGCTCAAGAAAATAGAATCAGGAATTTGAGAAGGCCATCTGCCATGGGTGCTCGAAAGCATGATGGATTGGATTTTGCACATGGTTTTAAAGCTCGGCCTCTTAATAAGAAGATTCTTTCAAGTAAAGGAGATATTGGTGTTTTCCGGAACAGAAAACAGGAAACCACTGTGCCAATGGAATTTAATTTCCATACGGAAAAGAGGGTTCAGCATAACCCGCCAATTGAACTCTTTAGCAAGATGTCCCTAACATCCGAAGTCCAGTCAACTAGTGGATCTCAGTTTAAACTACCTCGGCATTCCAGGGTGTTCAGAGAGgattcaaaagaaaatataggaaGTTCTTTTCATCTGGATGCAAAGGAAATGGCTTTCGTATTTGGGGGAAAGCAAATTCATAGTGGGAGGGAAGGTTGCGACGGTGAAACTGGTACTCTGTTGGCTGCAAGGAGGAGCTTAGGAATTCGATGA 1578 0.4309 METYLGEEEEKEMMREEEDMEIEEQVFVAHEIDLDYEFDAGRFFDFSAQETPAQARQAELWFQSAGSYPPSPFVAKLVVREDDVSASSESERPECATAVHGAKSIVPSGIGFSRIVFHHDGSKGGGGSGNISALLSGVPRDVNMQLLQVTTGLTFSSKTISGNLNSKVKSAVMKCSTLMKPTASQLAKLNQPPQIVSARFQKVQDHNKKMNLSTSSGIECQAAKRQKLEGGLLHKVGDVKQQVNFVHKAPKKVATVDQNSGHSKLKITIPREPDLETAHRAQRIRPKNASEVEVVTVTAPRFKARPLNRKILNAPLLPLSKRSTPRLPEFQEFHLKTQERAMQHSSATSSSSLHCNDSNKDLDKHTAVSAQENRIRNLRRPSAMGARKHDGLDFAHGFKARPLNKKILSSKGDIGVFRNRKQETTVPMEFNFHTEKRVQHNPPIELFSKMSLTSEVQSTSGSQFKLPRHSRVFREDSKENIGSSFHLDAKEMAFVFGGKQIHSGREGCDGETGTLLAARRSLGIR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2798 525 MobiDBLite consensus disorder prediction 338 371 - -
Ssu2g2798 525 Coils Coil 6 26 - -
Ssu2g2798 525 Pfam Cell cycle regulated microtubule associated protein 265 432 IPR027330 -
Ssu2g2798 525 PANTHER TARGETING PROTEIN FOR XKLP2 18 522 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Ssu2g2798 525 PANTHER CELL CYCLE REGULATED MICROTUBULE-ASSOCIATED PROTEIN 18 522 - -
Ssu2g2798 525 MobiDBLite consensus disorder prediction 340 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2798 Ssu-Chr2 88876956 88883281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2798 - - gmx:100806215 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2798 2 88876956 88883281 Ssu2g2798 2 88876956 88883281 ECH