LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu2g2783	ATGGCTTCCGCAGCGTCGGCGATGTCGGTCCAGGCGGGTCGGGTTCGGACCCTGAAAGAAGGTTCACGCGGTGAAGCGGGTGCGGGTGCGGGTCCCGTTGTGTACTGGATGTTCAGAGATCAACGGGTGAGAGACAATTGGGCTCTGATCCACGCCGTTGGTGAGGCCAACAAAGCCAACGTTCCCGTAGCCGTTGTTTTCAATCTCTTCCACAGCTTTCTTGGCGCCAAATCCCGTCATTTAGGGTTTATGCTCAGGGGCTTGCGCCAATTGTGCCACCGTATGCAACACACTCTTCAAATCCCCTTTTTCTTGTTCCAGGGAGAGGCAGAGGAGACTGTGCCAAAGTTTCTTAGAGAATGTGGAGCTTCACTTTTGGTGACGGATTTCTCACCGTTGCGGGAAGCACGGAGGTGTAAAGAAGAGATTTGCAAGAGGGTAAGTGATTCGGTTACGGTGCATGAAGTGGATGCTCACAACGTTGTGCCCCTTTGGGTTGCCTCTGATAAATTGGAGTACAGTGCTAAGACCATCAGGGCAAAGATAAACAAAAGGCTTTCTGAGTATCTCATTGATTTCCCTGACATTGAATTTGAGCCACCAACTAGGAAGTGGGTCGCTACTGAGAACCACTCCATTGATTGGGATGATCTCATTGCTGATGTTTTAAGGAGAGGAGCTGAGGTTCCTGAAGTTGATTGGTGTGAGCCAGGGGAAATTGTGGCAAGGGAAGTATTAATGGGAAGTGAGAGTGGATTCTTGACTAAAAGGTTGAAAGGTTATTCCCTAGTTCGCAACAACCCGTGCAACCCCAATGCGCTTTCTGGCTTATCTCCCTATTTGCATTTTGGACAGATATCTGCTCAGCGATGTGCTTTAGAAGCACGTAAGCTGCGAAATTCACATCCTCAAGCAATTGATGCTTTCTTGGAAGAGTTGATTGTGCGGAGAGAGCTTGCTGATAACTTTTGCTTCTACCAGCCTCATTATGATTCATTAAAAGGAGCATGGGGGTGGGCTCAGAACACCTTAATCGAACATGCCACTGATAAGCGAGAACATATTTACACGAGGGAGCAGTTGGAGAAGGCGCAGACTGCTGATCCCCTCTGGAATGCTTCTCAGCTGGAGATGGTTCACTATGGGAAAATGCATGGTTTTATGCGAATGTACTGGGCAAAGAAGATACTTGAGTGGACACGAGGACCTGAAGAAGCCCTTGagatatctatatatttaaatgacaaGTATGAATTAGATGGGAGAGATCCAAATGGTTATGCTGGCTGCATGTGGTCAATATGCGGGGTTCATGATCAGGGGTGGAAAGAGCGGCCCATTTTTGGGAAAATTCGATACATGAACTATGCAGGCtgcaaaagaaaatttgatgtCGATAAATACATTGCATGTGTCAATAAAATAGTTCGTGAGCTCAAAAAGAGAAAGGCTGAAAACTTGCTATCTCAAAAGGAGAAAGTACTTCGCTGTTGTGATCGTGAAGATTGA	1509	0.4619	MASAASAMSVQAGRVRTLKEGSRGEAGAGAGPVVYWMFRDQRVRDNWALIHAVGEANKANVPVAVVFNLFHSFLGAKSRHLGFMLRGLRQLCHRMQHTLQIPFFLFQGEAEETVPKFLRECGASLLVTDFSPLREARRCKEEICKRVSDSVTVHEVDAHNVVPLWVASDKLEYSAKTIRAKINKRLSEYLIDFPDIEFEPPTRKWVATENHSIDWDDLIADVLRRGAEVPEVDWCEPGEIVAREVLMGSESGFLTKRLKGYSLVRNNPCNPNALSGLSPYLHFGQISAQRCALEARKLRNSHPQAIDAFLEELIVRRELADNFCFYQPHYDSLKGAWGWAQNTLIEHATDKREHIYTREQLEKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYELDGRDPNGYAGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIACVNKIVRELKKRKAENLLSQKEKVLRCCDRED	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu2g2783	502	ProSitePatterns	DNA photolyases class 2 signature 2.	436	455	IPR032673	-
	Ssu2g2783	502	PANTHER	DEOXYRIBODIPYRIMIDINE PHOTOLYASE	6	494	-	-
	Ssu2g2783	502	SUPERFAMILY	Cryptochrome/photolyase, N-terminal domain	32	216	IPR036155	-
	Ssu2g2783	502	Gene3D	HUPs	8	158	IPR014729	-
	Ssu2g2783	502	ProSitePatterns	DNA photolyases class 2 signature 1.	309	323	IPR032673	-
	Ssu2g2783	502	Gene3D	DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3	333	483	-	-
	Ssu2g2783	502	Gene3D	-	159	332	-	-
	Ssu2g2783	502	SUPERFAMILY	Cryptochrome/photolyase FAD-binding domain	225	469	IPR036134	-
	Ssu2g2783	502	ProSiteProfiles	Photolyase/cryptochrome alpha/beta domain profile.	31	164	IPR006050	-
	Ssu2g2783	502	Pfam	DNA photolyase	33	194	IPR006050	-
	Ssu2g2783	502	TIGRFAM	phr2: deoxyribodipyrimidine photolyase	8	470	IPR008148	GO:0003904\|GO:0006281

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu2g2783	K01669		-	gmx:100170749	955.281

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu2g2783	2	88641352	88644895	Ssu2g2783	2	88641352	88644895	ECH