Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2780 ATGAATCGCGTTGCATTGCCCAAATCCATTGCCCAGCGTTTCAGAGGCATCCACCACAGCGCGTGGAAGCAATTCTGTAACCGTTGCGAAACCCAGGTCCAAAGTGCTGGGCCCGTGGCCTCTCTTCTCAAGTCCCGTTCCGTTATACGGTTCCGCGGGCCTGACACCCTCAAGTTCCTTCAGGGCCTGTTGACCAACGATGTACGCAGGTTTGGTGAACCCATTGGTGAAAAAACCGAAAACTTGCCCACGCCCAACGTGCCTGCTACGTCGGTCACTCCTATTTATGCTGCGCTATTGACCCCTCAAGGCAGATTCCTCTACGACCTCTTTCTCTATAAGCCTCCCACGTGCGACACCAAGCTCGATGACACCGGCACTGGCCCTGAGTCCCACCCACACGAACCCTTTCATTTGTTTGCTGACGTGGATGCTTCTGTGTTGGATGAATTGTTGCAAACCTTCAACAAATACCGGTTGAGGTCAAAGGTTGAGATTGATGATGTCTCAAGTGATTTCTCATGTTGGCAGCGTTATGGTGCTGGCCTTCCTGAGAAGTCCTCACAATTAGAAGAACCAGAAGCAGCCTCTGTTGGCTGGGGTGCTGGTGTGGATCGTACTGCAATGTCATCTTCACATGGGAGTGATCACGGGTGGCAATGGTTTAAGGATCCCAGATTGGTCTGTCTTGGTTTCAGAGGGATCTTCCCATCGAATATAACTCCACCTCTAATTGAGGTTGACAAAGAGACTGATGAACAGAATTTCCTTCTGTGGAGAATAGAGAAGGGAGTAGCAGAAGGATCAACCGAGATTCCAAAAGGTGAGGCAGTACCGCTTGAGTATAATCTTGCAGGCCTTAATGCAATTAGCTTTGATAAAGGTTGCTATGTCGGCCAGGAACTCATAGCTCGTACACATCACAGGGGGGTGATTCGGAAGCGCATAGTTTCTCTAAGATTTCTCGATAATGATGGAAAAGAGTTGGTAAACAAAGTCGCTCCAGGCTCAGAAGTAATGAACACAGAATCTGGCAAAAAAGCTGGTGCAGTGACTACTGCCCTAGGATGTCGTGGGCTGGGGCTCTTGCGACTGGACGAAGCTTTGAAGGAGTCCAGTGCCTTGTCCATTCAGGGACAAGAGGATGTGAAGGTTGTTGCTAGTAGACCAGATTGGTGGCCTTCTGAATGGCTTCAAGATCATGGACAGCATGCTGCGTTTGCTTAG 1227 0.4971 MNRVALPKSIAQRFRGIHHSAWKQFCNRCETQVQSAGPVASLLKSRSVIRFRGPDTLKFLQGLLTNDVRRFGEPIGEKTENLPTPNVPATSVTPIYAALLTPQGRFLYDLFLYKPPTCDTKLDDTGTGPESHPHEPFHLFADVDASVLDELLQTFNKYRLRSKVEIDDVSSDFSCWQRYGAGLPEKSSQLEEPEAASVGWGAGVDRTAMSSSHGSDHGWQWFKDPRLVCLGFRGIFPSNITPPLIEVDKETDEQNFLLWRIEKGVAEGSTEIPKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRIVSLRFLDNDGKELVNKVAPGSEVMNTESGKKAGAVTTALGCRGLGLLRLDEALKESSALSIQGQEDVKVVASRPDWWPSEWLQDHGQHAAFA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2780 408 PANTHER UNCHARACTERIZED 30 396 IPR045179 -
Ssu2g2780 408 SUPERFAMILY Folate-binding domain 39 311 - -
Ssu2g2780 408 TIGRFAM ygfZ_signature: folate-binding protein YgfZ 255 320 IPR017703 -
Ssu2g2780 408 Gene3D Probable tRNA modification gtpase trme; domain 1 14 390 IPR027266 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2780 K22073 - gmx:100804156 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2780 2 88591229 88593881 Ssu2g2780 2 88591229 88593881 ECH