Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2770 ATGATGGCGCTCAATTCATTGTCACCACTCTCAATTAAATCTCTTCACCTATCTTCAAGCTCAACTTccaagatttcaaatatatcgCATTCTCATTCAAAGCCCTTCACTGTTGTGTGCCAGATGAACTCAAACAGAGATCATCGTGAAGAATCCACCGCGAAGTGGGGAAAAGTGGTTTCGGCCACGTTGGCAGCCGCGGTTATTGCCTTCAGCTCTGACATGTCTGCCCTTGCCGATCTCAACAAATTTGAGGCTGAAATGAGGGGTGAATTTGGGATAGGATCGGCTGCGCAATTTGGCTCCGCAGACCTCAGAAAAGCAGTGCACGTCAATGAAAATTTCAGAAGAGCCAATTTCACAGCTGCTGATATGAGAGAATCTGATTTTAGTGGTTCAACTTTCAATGGTGCATACCTCGAGAAAGCTGTTGCATACAAGGCAAATTTTGCAGGTGCCGATTTAAGTGATACATTGATGGATCGCATGGTTCTAAATGAAGCCAATCTCACTAATGCCATTCTCCTTAGAACAGTCCTCACACGGAGTGATCTTGGGGGTGCCATCATCGAAGGTGCTGACTTTAGTGATGCTGTGTTGGACCTTCCCCAAAAGCAGGCTTTATGCAAGTATGCCAGTGGCACAAATCCTGTGACAGGAGTAAGCACAAGAGTAAGTTTAGGTTGTGGGAACAAACGACGAAATGCTTATGGCTCCCCATCATCTCCCCTTTTAAGTGCTCCACCACAGAAACTGCTTGACCGAGACGGTTTCTGTGATGAAGCAACAGGGCTTTGCGATGCAAAGTAG 810 0.4519 MMALNSLSPLSIKSLHLSSSSTSKISNISHSHSKPFTVVCQMNSNRDHREESTAKWGKVVSATLAAAVIAFSSDMSALADLNKFEAEMRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFAGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLPQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCDEATGLCDAK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2770 269 Pfam Pentapeptide repeats (8 copies) 165 199 IPR001646 -
Ssu2g2770 269 Pfam Pentapeptide repeats (8 copies) 98 137 IPR001646 -
Ssu2g2770 269 Gene3D - 94 238 - -
Ssu2g2770 269 SUPERFAMILY Pentapeptide repeat-like 98 199 - -
Ssu2g2770 269 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 2 269 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2770 - - gmx:100805220 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2770 2 88440592 88443429 Ssu2g2770 2 88440592 88443429 ECH