Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2765 ATGCCAATAAAATCCATTATGTCCAGCGCAGTCCCACTCCTGACGCCGCGCCACGTGGCAGTGATCGGCGCGGGCGCCGCCGGTCTAGGGGCGGCACGCGAGCTCCGGCGAGAAGGGCATCGTGTGGTGGTTTTCGAGCGAGGGGACCAAGTGGGAGGCACGTGGGTGCACACTCCAGATGTGGAATCGGATCCGCTAGGTTTGGATCCGAACCGAGGCGTAGTCCCCTCGAGCCTGTACGATTCGCTCCGAACCAATCTGCCTCGGGAGTGCATGGGTTTCCGAGACTACCCCTTCAGGAAGAGGGAGGGGAAGGGGAGGGATTCCAGAAGGTTCCCGGGTCACAAAGAGGTGTTGATGTATTTGCAGGATTTCGCCGCTGATTTTGAAATCGGTGAACTGGTGAGGTTTCAGACGGAAGTGGTGTTTGCTGTGTTGGTTGAGGGTGGAAAGTGGAGGGTGACATCAACATCACCCAAAAGTGATCGTGTTCGTGTGGATGAGATTTACGACGCCGTTATCATTTGCAACGGACATTACGTTCAGCCTCGTCTCGCTCATGTCCCCgGCATTAGTGCATGGCCAGGGAAGCAGATGCATAGCCATAATTATAGAAGACCTGAGCCCTTTCAAGATCAAGTTGTAGTTCTAATAGGTAGTTCTGCTAGTGCGGTTGATATTTCTCGAGAAGTCTCAACAGTTGCTAAAGAAGTCCACATTGCAGCTAGGTCAGTTGAAGAAAATAAGCTAGGAAAGATGCCTGGCCATGAAAACATGTGGCTTCATTCTATGATTGACAGCGTTCATGAAGATGGTACAGTGTTTTTTCAAGATGGAAATGCAGTTGGTGCTGACTTCATCATACATTGCACAGGGTACAAGTACGATTTCCCTTTCCTTGAAACCAATGGGGAGGTGACTATAGATGACAACCGTGTTGGACCACTCTACAAGCATGTTTTTCCACCAGCGTTGGCTCCATGGCTTTCATTTGTTGGGTTGCCTTGGAAGGTTGTTCCCTTTCCCATGATCGAACTGCAGAGCAAGTGGATAGCAGGAATTTTATCTAATCGCATTGCACTTCCTTCAAAAGAAGAGATGACTGAAGATATTGAAGCTTTTTACTCATCACTTGAAGCCTCTGGCACTCCTAAGCGTTACACTCATCATATGGGCCCTgttcagTGGGACTACAATAACTGGATTGCGGATCAGTGTGGGTTTCCTTCTATTGAAGAATGGAGAAAGCAAATGTCTATGGCCACGTCTAAGAACAGGATCCTGCGACCCGAGTCTTACCGTAACGAGTGGGAGGATGATGACTTGGTCCAGCAGGCTCAACAGGATTTTGCCAATTATCTCATCTGA 1368 0.4927 MPIKSIMSSAVPLLTPRHVAVIGAGAAGLGAARELRREGHRVVVFERGDQVGGTWVHTPDVESDPLGLDPNRGVVPSSLYDSLRTNLPRECMGFRDYPFRKREGKGRDSRRFPGHKEVLMYLQDFAADFEIGELVRFQTEVVFAVLVEGGKWRVTSTSPKSDRVRVDEIYDAVIICNGHYVQPRLAHVPGISAWPGKQMHSHNYRRPEPFQDQVVVLIGSSASAVDISREVSTVAKEVHIAARSVEENKLGKMPGHENMWLHSMIDSVHEDGTVFFQDGNAVGADFIIHCTGYKYDFPFLETNGEVTIDDNRVGPLYKHVFPPALAPWLSFVGLPWKVVPFPMIELQSKWIAGILSNRIALPSKEEMTEDIEAFYSSLEASGTPKRYTHHMGPVQWDYNNWIADQCGFPSIEEWRKQMSMATSKNRILRPESYRNEWEDDDLVQQAQQDFANYLI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2765 455 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 13 453 - -
Ssu2g2765 455 SUPERFAMILY FAD/NAD(P)-binding domain 261 440 IPR036188 -
Ssu2g2765 455 Pfam Flavin-binding monooxygenase-like 17 244 IPR020946 GO:0004499|GO:0050660|GO:0050661
Ssu2g2765 455 Pfam Flavin-binding monooxygenase-like 261 374 IPR020946 GO:0004499|GO:0050660|GO:0050661
Ssu2g2765 455 SUPERFAMILY FAD/NAD(P)-binding domain 15 246 IPR036188 -
Ssu2g2765 455 PANTHER DIMETHYLANILINE MONOOXYGENASE 13 453 - -
Ssu2g2765 455 PRINTS Flavin-containing monooxygenase (FMO) signature 199 213 IPR000960 GO:0050660|GO:0050661
Ssu2g2765 455 PRINTS Flavin-containing monooxygenase (FMO) signature 277 304 IPR000960 GO:0050660|GO:0050661
Ssu2g2765 455 PRINTS Flavin-containing monooxygenase (FMO) signature 342 355 IPR000960 GO:0050660|GO:0050661
Ssu2g2765 455 PRINTS Flavin-containing monooxygenase (FMO) signature 226 241 IPR000960 GO:0050660|GO:0050661
Ssu2g2765 455 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Ssu2g2765 455 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Ssu2g2765 455 Gene3D - 19 434 IPR036188 -
Ssu2g2765 455 Gene3D - 187 290 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2765 Ssu-Chr2 88370540 88373754 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2765 - - gmx:100793203 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2765 2 88370540 88373754 Ssu2g2765 2 88370540 88373754 ECH