Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2719 ATGGCTCTTCCCTCACTGTCCTTTCTCTTCATCTTCACCTCCTTCATTGTCTCCGTCTCACACTCAATACCCTTCATTGTTATTCAtgGAATTGGGGATCAGTGCTCTAACCGTGGAGTGAAAAAATTCACACAGCTATTGAGCAGCTTCTCTGGCGCTGATGGATATTGCGTCGAGCTTGGCAATGGATCATGGGATTCATGGTTTATGCCTTTAAAAGAGCAGGTAATAGGTCAGAAGGATTTTGCTGTGAAGCAAATGAAAGAATTGAAGCAAGGATACAACATTGTTGGACTTTCCCAGGGAAATTTAATTGGTCGAGGTGTGGTGGAATTTTGTGAAGGAGGACCTCCAGTTAAAAACTTTATCTCTTTAGCAGGCCCTCATGCTGGTACTGCTTCAGTTCCTCTATGTGGTTTGGGTATCTTCTGCATTATTGCAGACAATCTCATCAAGGGAGAGGTTTATAGTAGCTATATTCAAgAACACTTAGCTCCTAGTGGATATCTTAAATTACCAAATGCCATACCTGATTATTTGGAGAACTGTAGATTTCTCCCAGTGCTTAACAATGAAATACCAGATCAGAGAAACTCCACTTACAAGGAAAGATTTAGTAGCTTGCAGAATTTGGTACTTATCATGTTTGAGCACGACACTGTTTTAATACCAAAGGAAACTTCCTGGTTTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCGACAGAACTCTACATTGAGGACTGGATAGGTTTAAGAACTCTAGATGAAGCTGGTAAAGTTCACTTCATTAGTGTTCCTGGAAAGCATCTTGGAATCTCCCAGGAGGATATGAAAAAGCATGTAGTGCCATATTTGAAGGATCAAACATCCACATATGATAGCACCAATAAGGCTAGGTTCAGGATGCGAAAAGTTAATCAGAAAGTTACTCAAAGCAACATGATGAAGCAATCTCAAATGTTGGAGGTAGAACCATCAACCACTCCATTACTTGATGGATCATTGTCATATTGGTGGCCTACATCATTCAAGGCTTTCGTTGGTGAATTGATTGGCATTAATGAAGAGTAA 1089 0.4031 MALPSLSFLFIFTSFIVSVSHSIPFIVIHGIGDQCSNRGVKKFTQLLSSFSGADGYCVELGNGSWDSWFMPLKEQVIGQKDFAVKQMKELKQGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGLGIFCIIADNLIKGEVYSSYIQEHLAPSGYLKLPNAIPDYLENCRFLPVLNNEIPDQRNSTYKERFSSLQNLVLIMFEHDTVLIPKETSWFGYYPDGYFKPVLPPQSTELYIEDWIGLRTLDEAGKVHFISVPGKHLGISQEDMKKHVVPYLKDQTSTYDSTNKARFRMRKVNQKVTQSNMMKQSQMLEVEPSTTPLLDGSLSYWWPTSFKAFVGELIGINEE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2719 362 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 308 - -
Ssu2g2719 362 PRINTS Palmitoyl protein thioesterase signature 16 38 IPR002472 GO:0098599
Ssu2g2719 362 PRINTS Palmitoyl protein thioesterase signature 91 107 IPR002472 GO:0098599
Ssu2g2719 362 PRINTS Palmitoyl protein thioesterase signature 268 286 IPR002472 GO:0098599
Ssu2g2719 362 PRINTS Palmitoyl protein thioesterase signature 223 241 IPR002472 GO:0098599
Ssu2g2719 362 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 7 308 - -
Ssu2g2719 362 Pfam Palmitoyl protein thioesterase 24 275 - -
Ssu2g2719 362 Gene3D alpha/beta hydrolase 15 304 IPR029058 -
Ssu2g2719 362 SUPERFAMILY alpha/beta-Hydrolases 20 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2719 Ssu-Chr2 87543611 87549595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2719 17 304 Acyl Lipid Metabolism Gene Families AT3G60340 67.586 2.17e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2719 K01074 - gmx:100809770 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2719 2 87543611 87549595 Ssu2g2719 2 87543611 87549595 ECH