Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2695 ATGGCTTCCCAAGTTCTTCTTCAGCAGGCACTGTTTGCCCCCAAGCTGagttttccttcttcttctctcgTCTCTTCTCGCAACGTAACGTTAATTTCTAGGTTTCCTTCGACCCCAATTTCGTGGCGGTGCACTCCTCTTATTGCTAAGCCGAGTTTTGTTATGAGAGCGGACTCCAACCTCGAAGGCGGTGGTGAAGCCACCGAAGATGTTCCTTCGGATAATGTTGAAGAAGTTCCGGAAGGTGAAGCAGAACAAGTTTCGGATTCTGAAGCTCCGAAATCGCCCAGAAAACCCCGAGTCAAGCTTGGAGACATCATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAGAAGCAAAGGCCAACTCCAGACATTAGGACTGGGGATATTGTGGAAAtcaaattgGAGGTTCCTGAGAACAAGCGTAGGTTGTCCATTTATAAAGGCATTGTCATCTCAAAACAAAATGCTGGTATTCACACAACTATTCGAATCCGAAGAGTCATTGCCGGCACAGGGGTTGAGATAGTCTTCCCAATTTACTCTCCAAACATCAAAGAAATCAAAGTGGTAAGCCACCGCAAGGTCAGGAGGGCAAGATTGTACTATCTGAGAGACAAGCTTCCGAGATTCTCCACTTTCAAATGA 654 0.448 MASQVLLQQALFAPKLSFPSSSLVSSRNVTLISRFPSTPISWRCTPLIAKPSFVMRADSNLEGGGEATEDVPSDNVEEVPEGEAEQVSDSEAPKSPRKPRVKLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRVIAGTGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2695 217 MobiDBLite consensus disorder prediction 59 99 - -
Ssu2g2695 217 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 20 217 - -
Ssu2g2695 217 TIGRFAM rplS_bact: ribosomal protein bL19 114 209 IPR001857 GO:0003735|GO:0005840|GO:0006412
Ssu2g2695 217 PRINTS Ribosomal protein L19 signature 170 193 IPR001857 GO:0003735|GO:0005840|GO:0006412
Ssu2g2695 217 PRINTS Ribosomal protein L19 signature 111 140 IPR001857 GO:0003735|GO:0005840|GO:0006412
Ssu2g2695 217 PANTHER RIBOSOMAL PROTEIN L19 20 217 IPR001857 GO:0003735|GO:0005840|GO:0006412
Ssu2g2695 217 MobiDBLite consensus disorder prediction 71 85 - -
Ssu2g2695 217 Gene3D - 76 216 IPR038657 -
Ssu2g2695 217 Pfam Ribosomal protein L19 114 210 IPR001857 GO:0003735|GO:0005840|GO:0006412
Ssu2g2695 217 SUPERFAMILY Translation proteins SH3-like domain 114 217 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2695 Ssu-Chr2 87209086 87211518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2695 K02884 - gmx:100500328 379.407