Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2682 ATGTTGAGGGAAGGAGTATTGGCTGAAGGTGAAGACACCGACAATGGCATTGTATTAGTGGCATGTAAAGATGAAAGGTCATGCTTGCAACTTGAAGAATGCATCACCAACAGCCCGAAAAAGGTCATTCATGAAGAATGGAAGAAGTACTTACTAAACAAAGTACAGCTGCGTGACATAGTGCATAAGAAAAAGAAGCCTAAGGATCCCAAACCCAAAGGTTTTGGGATTCTTGATGGAGTTACTCCCATAATACCCGCTCAGAATGCAGAAACCACCAGCATTAGTAAGCAGGAGCATGATGCGCTCTTGGCAGCAGCATCAAAACTAagaaatgttgttgaaaatgatCATGTTGTTGAGGATAGCCCTCAGCCTGATTTGGGCAGACGGGGTTGTgctaaaagaaagagaaaagtggGGAATAGAAATGGCCCAGTCTTTCTTGATGGCTCTGGAGTTCAGAACAATGATAAAGAGGAATCAACGATTCATAAAATTGGGATGTctgattcaaaaaataaagttgatgaAGAAGAGACTAATCATGTCAGTGCTGGTAGATTTTGTGAAACCATGCAAGGTGGGGCATCTGTGGAAAACATAGTTCTTCGAAGGCATACTAATCCTGATGCTGCAGCAAGAAACGGGAAGCCACTACCACCAGTGCATTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGATATATTAAAGCCCTCTATAGTCATTGTTTATCATCCAGACATGGCTTTTGTTAGGGAAATCGAAGTCTACAAAGCTGAGAATCCCTCAAAAAGGTTGAaagtatattttcttttctatgaaGATTCAACTGAGGTTCAGAAGTTTGAGGCGAGTATTCGTAGAGAGAATGGAGCATTTGAATCTTTGATTAGGCAAAAATCTATGATGATGATTCCAGTTGACCAGAGTGGGCATGGTTTAGGATTGAATTCTACTTTAGAGTCAGATTTAAATACTACTCAAAACTCAGTAACCAGAAAAGCAGGTGGGAGAAAggagcctgataaagaaatgcAGGTTATTGTGGACATGAGGGAGTTCATGAGCAGCCTTCCAAGTGTTCTTCATCAAAAGGGAATGCGCATCATTCCAGTGACGCTAGAAGTTGGAGACTATATCCTATCGCCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACGTCAGGTCGTCTATACCACCAGGTGGAGACAATGGTACGATATTACAGAATACCTGTACTCTTGATCGAGTTTTCACAGGATAAGAGTTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACTCCAAATAGCATCATATCAAAGTTGTCTTTGCTTTCTCTACACTTCCCCCGGCTACGAATAATCTGGTCTCGAAGTTTGCATGCAACTGCTGAAATATTTGCTTCGCTGAAGGCAAATCAAGATGAGCCAGATGAAACAAAAGCAATCAGAGTGGGTGTCCCCTCGGAAGAGGGAATTGTGGAAAATGATGTGAGGGCTGAAAATTACAATACGTCGGCTGTGGAGTTTCTAAGAAGACTTCCAGGTGTTACAGACTCAAACTACAGGGCTATAATGGATGGGTGTAAGAGCTTGGCAGAACTTGCACTTCTTCCTGTAGAGAAGCTAGCGGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTTAGAGACTTTCTAGATGCTAAATACCCAACTTTGTTGTGA 1740 0.396 MLREGVLAEGEDTDNGIVLVACKDERSCLQLEECITNSPKKVIHEEWKKYLLNKVQLRDIVHKKKKPKDPKPKGFGILDGVTPIIPAQNAETTSISKQEHDALLAAASKLRNVVENDHVVEDSPQPDLGRRGCAKRKRKVGNRNGPVFLDGSGVQNNDKEESTIHKIGMSDSKNKVDEEETNHVSAGRFCETMQGGASVENIVLRRHTNPDAAARNGKPLPPVHFYALESDQPILDILKPSIVIVYHPDMAFVREIEVYKAENPSKRLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHGLGLNSTLESDLNTTQNSVTRKAGGRKEPDKEMQVIVDMREFMSSLPSVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLSLHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLRDFLDAKYPTLL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2682 579 Gene3D - 506 577 - -
Ssu2g2682 579 SMART ERCC4_2 348 428 IPR006166 GO:0003677|GO:0004518
Ssu2g2682 579 MobiDBLite consensus disorder prediction 120 162 - -
Ssu2g2682 579 Gene3D - 348 495 - -
Ssu2g2682 579 SUPERFAMILY Restriction endonuclease-like 345 483 IPR011335 -
Ssu2g2682 579 Pfam ERCC4 domain 351 480 IPR006166 GO:0003677|GO:0004518
Ssu2g2682 579 SUPERFAMILY RuvA domain 2-like 510 574 IPR010994 -
Ssu2g2682 579 PANTHER DNA REPAIR ENDONUCLEASE XPF 13 575 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2682 K10848 - gmx:100812359 1036.17