Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2679 ATGGGTCGGAGGAACAATGAACCAAACTCCATTCTCTCGCAGCGTTTGATCCTCCCCTTGGTGTGTTTTGCTTCGTGCGGTTTGGTCTACGCGCTCCTCTCTGCGGCGCTCGCAAACGGCAGGAGCAGAGTTTCGGAGTTTGGGAGGTTGGTTGAAGATGGCGTGGCGGCGCAGAATGAGGGAGGGTGCTGTAGGGGGATTCAGAATCTGGAGCTTTGGGGTGCAGCTGTGAAGTGGGGTTCCGAGTTTAAATTCAACAATTCGGAAGGGTGCTGCAACGCGTGCAAATCCATGTGTTCTGGAAAAGATGGGCCTTGCCTCTGTGATACTTGGGTCTTTTGTGGGAATCGTGAGGCCTGTGGATCCAAGTTCGGTGAGTGTTGGTTGAAGAAACAAAAGGACAGCTTAGCACCTGAACGGCAAGAAGAAGTGCCTCTGGTGGAAGTGGTCGGTTGGACTTCTGGTCTTATCTTTGGGAAAGGAGAGGGTATTATTGGACTGGAAACTGAATATGGAACTCTTCATATTAAACTTTTACCTGATTGTGCCCCACACTCTGTTGCCTACATTCTAGAATTGTTGGCTTTGCATCATTGTGCTGGCTGCCAATTTTACCGCTCAGAGAGCCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAGAAAATGCTGCATTTGGTCCCCCTTATGCATTAATTCAAGGGACCCTGGAAGCCCAAGGCACAACATTCAATAAACTTCCGGTGGAAGATTGTCCAACCCTTAGAAGGGGCTCAGTTGCTTGGATTGGTTCTGGCCCTGAATTCTTCATTAGCCTAGCTGACCATTCAGAGTGGAAACATGAATACACTGTATTTGGTTCTGTTCTTCCAGAAGACATGCATATTGCTGAGAAAATCACTACACTCCCCACAATATCTGATGTTTGGAACAATGTTAACGTCACCGTTTTGGAAAAACCGGTTCCCTTGTTACTCCGAAGAATCCGCAAAAGCCACGTAGATGAAATCTGA 1014 0.4783 MGRRNNEPNSILSQRLILPLVCFASCGLVYALLSAALANGRSRVSEFGRLVEDGVAAQNEGGCCRGIQNLELWGAAVKWGSEFKFNNSEGCCNACKSMCSGKDGPCLCDTWVFCGNREACGSKFGECWLKKQKDSLAPERQEEVPLVEVVGWTSGLIFGKGEGIIGLETEYGTLHIKLLPDCAPHSVAYILELLALHHCAGCQFYRSESRGQSWDSEGNHIENAAFGPPYALIQGTLEAQGTTFNKLPVEDCPTLRRGSVAWIGSGPEFFISLADHSEWKHEYTVFGSVLPEDMHIAEKITTLPTISDVWNNVNVTVLEKPVPLLLRRIRKSHVDEI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2679 337 PANTHER EXPRESSED PROTEIN 1 332 - -
Ssu2g2679 337 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 332 - -
Ssu2g2679 337 SUPERFAMILY Cyclophilin-like 160 318 IPR029000 -
Ssu2g2679 337 Gene3D - 158 321 IPR029000 -
Ssu2g2679 337 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 314 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2679 Ssu-Chr2 86995910 87000203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2679 - - gmx:100800178 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2679 2 86995910 87000203 Ssu2g2679 2 86995910 87000203 ECH