Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2661 ATGTTGGTCTTTCAAGCAAAGTGCGTTAAACACATGGAAGCTTTTACTCAAAGGTGTATATTTAGATGGCCCATTACACTTTATGCTCGTTACTCTGATACTCCTCAGAAGAAGTCTAAGCTTGCTCCTTTGCAGGAGAGAAGAATGATAGACCAGTGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAATGGTTGCTCCAGCTTTCGCAAGGGAAGACCTGATGGTGGCAATGGGGGGAGAGGCGGTGACGTGATTCTGGAATGCTCTCCCAGAGTTTGGGACTTCAGTGGTTTGCAGCGTCACCTGATAGCTGAGAAAGGAGGACCTGGATCATCAAAAAAGATGATAGGTACCAGGGGTGCTGATAAGGTTGCTCGTGTACCGATTGGCACTGTACTTCATCTCGTTAACGGTGATATTCCTTCTGTTGTCAAAACTCAATCCTCAACAGATATAGACCCTTGGGAGATTCCTGGGGCACTTGTTGATGATCTTCCTGACCCTGGCGATGGTTCTACCTCCAGTGTTTCAAGTGGGGAAGTCAAAGCAATACATTCTACTGGCTGCTCCACATCACAAGCTGAAGAAACTAATGTTGAGAAATCTGAAAAATTAAGACAAGTTGCATCAACAGATGTATTTTCTCAACTGTCCACTTCTAATGGAGCTCCTGAATTTGGTACAGAGGATATTGGAGAGAAACAGGACATACTATATAATGTTGCTGAGTTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGCGTATTGTTCCAAAGATTCAAGGAAGCCTGTGACTATGAAGGCAGGGGCATGTCAACATATATCTAATCTTCAGGGCCCTGACAGTGTTCACTCCGTTCTGCATGCAGGTTCACCTGGTTCTGAGACTGTTCTTATATTAGAACTCAAGAGTATTGCTGATGTGAGCTTTGTGGGAATGCCTAATGCTGGTAAAAGCACTTTACTTGGGGCTATATCAAGGGCTAAGCCTGCTATTGGTGACTATGCCTTCACTACTCTTAGGCCAAATTTGGGGAATCTAAACTTTGATGATCTCTCAATAACTGTGGCTGATATTCCTGGACTTATAAAAGGTGCACACCAAAATCGTGGACTCGGACATGCATTTCTGCGCCACATAGAACGCACCAAGGTTCTTGCTTACGTGGTAGACTTGGCTGCTGctttaaatggaaaaaagggAATTCCACCATGGGAACAGCTGAAAGACTTAATTCTAGAGCTCGAGTACCATCAGGATGGTTTATCCAATCGGCCATCCTTGATAGTTGCAAATAAGATTGATGAGGAAGGTGCAGGTGAAGTGTATAAAGAGTTAAAGAGAAGGGTCCAGGGTGTTCCCATCTTTCCTGTTTGTGCTGTTTTGGGGGAAGGGATAGCAGATCTTAAAGCTGGCCTTAAAATGCTTGTCAATGCTGAAATGTCATATAAACTTTGCCTAGATCAAATTTTGCTTGCTTAG 1515 0.4343 MLVFQAKCVKHMEAFTQRCIFRWPITLYARYSDTPQKKSKLAPLQERRMIDQCKIFAKAGDGGNGCSSFRKGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGPGSSKKMIGTRGADKVARVPIGTVLHLVNGDIPSVVKTQSSTDIDPWEIPGALVDDLPDPGDGSTSSVSSGEVKAIHSTGCSTSQAEETNVEKSEKLRQVASTDVFSQLSTSNGAPEFGTEDIGEKQDILYNVAELTEEGQQIVIARGGEGGLGNAYCSKDSRKPVTMKAGACQHISNLQGPDSVHSVLHAGSPGSETVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPAIGDYAFTTLRPNLGNLNFDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALNGKKGIPPWEQLKDLILELEYHQDGLSNRPSLIVANKIDEEGAGEVYKELKRRVQGVPIFPVCAVLGEGIADLKAGLKMLVNAEMSYKLCLDQILLA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2661 504 Pfam GTP1/OBG 50 135 IPR006169 -
Ssu2g2661 504 Gene3D - 316 496 IPR027417 -
Ssu2g2661 504 Pfam 50S ribosome-binding GTPase 319 444 IPR006073 GO:0005525
Ssu2g2661 504 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 22 167 IPR045086 GO:0003924|GO:0005525
Ssu2g2661 504 PANTHER BNAA08G29050D PROTEIN 22 167 - -
Ssu2g2661 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 488 IPR027417 -
Ssu2g2661 504 PRINTS GTP1/OBG GTP-binding protein family signature 340 358 IPR006073 GO:0005525
Ssu2g2661 504 PRINTS GTP1/OBG GTP-binding protein family signature 384 402 IPR006073 GO:0005525
Ssu2g2661 504 PRINTS GTP1/OBG GTP-binding protein family signature 319 339 IPR006073 GO:0005525
Ssu2g2661 504 PRINTS GTP1/OBG GTP-binding protein family signature 367 382 IPR006073 GO:0005525
Ssu2g2661 504 PANTHER BNAA08G29050D PROTEIN 218 501 - -
Ssu2g2661 504 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 218 501 IPR045086 GO:0003924|GO:0005525
Ssu2g2661 504 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 317 489 IPR031167 GO:0005525
Ssu2g2661 504 Gene3D GTP1/OBG domain 49 315 IPR036726 -
Ssu2g2661 504 SUPERFAMILY Obg GTP-binding protein N-terminal domain 49 281 IPR036726 -
Ssu2g2661 504 ProSiteProfiles Obg domain profile. 47 316 IPR006169 -
Ssu2g2661 504 PIRSF GTP-binding_obg 46 497 IPR014100 GO:0000287|GO:0003924|GO:0005525
Ssu2g2661 504 CDD Obg 317 488 IPR031167 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2661 Ssu-Chr2 86535797 86538047 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2661 - - gmx:100808337 877.856