Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2657 ATGACGGCTTCTTCTGAGAATTGCGTGTCAAGCCAGAGTTCTCTCACCAGACTTGCTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACTCTTTGTGATTCTGATCCGCTCCACTACTATGCCTTCCGTGAAATGCTTCTGGAGATTGGTTTTAATGGAGGTGTTCCTATAACAGaggaattttttattgatactGTTGCTGGCAAGCACAATGATGATATTGCCTTGGCTCTCTTTCCTGGTGATCTGGAACGAGGTTTAAAGTTTGTAGATGATAAGGAAACCATGTTCCGGAGATTGGCAGCAGAGCAACTGAAGTCTTTGAATGGCCTTGATAAAGTGAGGAAATGGATTGAAAATCACGGGTTGAAGAGAGCTGCAGTTACCAATGCTCCAAGAGCAAATGCTGAACTCATGATCTCAATACTTGGTCTCTCAGATTTCTTTGATGCTGTTATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACCTGAAAGGCCTTGAAGCTCTGAAGGCATCAAAGGATCACACATTTGTATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTTTAGCTACTCGAAACCCAGAACATTTATTGATGGAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGATGATCCAAAATTGTGGGCAGGTTTGGAAGAACTTGAGAAGGCTGGTGCTCGTTCAGTTTGA 744 0.4274 MTASSENCVSSQSSLTRLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNGGVPITEEFFIDTVAGKHNDDIALALFPGDLERGLKFVDDKETMFRRLAAEQLKSLNGLDKVRKWIENHGLKRAAVTNAPRANAELMISILGLSDFFDAVIIGGECEHAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYDDPKLWAGLEELEKAGARSV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2657 247 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 2 243 - -
Ssu2g2657 247 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
Ssu2g2657 247 SUPERFAMILY HAD-like 18 239 IPR036412 -
Ssu2g2657 247 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 117 205 IPR006439 -
Ssu2g2657 247 CDD HAD_BPGM-like 23 208 - -
Ssu2g2657 247 Pfam Haloacid dehalogenase-like hydrolase 24 205 IPR041492 -
Ssu2g2657 247 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 243 - -
Ssu2g2657 247 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 228 - -
Ssu2g2657 247 Gene3D - 22 229 IPR023214 -
Ssu2g2657 247 SFLD Haloacid Dehalogenase 21 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2657 Ssu-Chr2 86509368 86512339 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2657 - - gmx:100802762 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2657 2 86509368 86512339 Ssu2g2657 2 86509368 86512339 ECH