Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2656 ATGACCAACTTCTTCTTAAGATTCCCTTCCTTCCCTAACGACGTTTCGTGGCAGGTAAAATTTTGTCCTCCACAAATTCACCTCGGCTGCGTCAAAATAAATCTCAAACAAACTGTCACGAAGGCTTCTTCTCAGAATTGCGTTGAAAGCATGAGTTCTCTCACCAGACTTGCTTCACTTGAAGCAGTGCTCTTTGATGTAGATGGAACTCTGTGTGATTCTGATCCACTCCACTACTATGCTTTGCGTGAAATGCTCGAAGAGATTGGTTTTAATGGAGGTGCTCCTATAACGGAGGAATTTTTTATTGAGACATTTTCTGGCAAGCACAGTGATGATACTGCCTTGGTGGTCTTTCCTGGTGATCTGGAACGAGGTTTGAAGTTTGTGGATGATAAGGAAGCCATGTTCCGGAGATTAGCGGCAGAGCAACTGAAGCCTTTGAAAGGCCTTGATAAAGTGAGGAAATGGGTTGAAAACCATGGTCTGAAGAGAGCGGCAGTTACCAATGCTCCAAGAGCAAATGCAGAACTCATGATCTCAAAACTTTGTCTCTCAGATTTCTTTGATGCTGTTATTATTGGTGATGAATGTGAACGTGCCAAACCTCATCCAGACCCCTACTTGAAAGCTCTTGAAGTTCTGAAGGCATCAAAGGATCATGCATTTGTATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTGGCAGCTGGGATGCCTGTTATAGGTTTAGCTACACGAAACCCCGAGCATTTACTTATGGAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAAGCTGGTGCGCGTTAA 855 0.4363 MTNFFLRFPSFPNDVSWQVKFCPPQIHLGCVKINLKQTVTKASSQNCVESMSSLTRLASLEAVLFDVDGTLCDSDPLHYYALREMLEEIGFNGGAPITEEFFIETFSGKHSDDTALVVFPGDLERGLKFVDDKEAMFRRLAAEQLKPLKGLDKVRKWVENHGLKRAAVTNAPRANAELMISKLCLSDFFDAVIIGDECERAKPHPDPYLKALEVLKASKDHAFVFEDSVSGIKAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYEDPKLWAALEELDKAGAR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2656 284 SUPERFAMILY HAD-like 53 277 IPR036412 -
Ssu2g2656 284 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 40 281 - -
Ssu2g2656 284 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 134 244 IPR006439 -
Ssu2g2656 284 Gene3D Putative phosphatase; domain 2 75 143 IPR023198 -
Ssu2g2656 284 SFLD Haloacid Dehalogenase 60 268 - -
Ssu2g2656 284 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 60 268 - -
Ssu2g2656 284 Pfam Haloacid dehalogenase-like hydrolase 63 244 IPR041492 -
Ssu2g2656 284 Gene3D - 61 269 IPR023214 -
Ssu2g2656 284 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 40 281 - -
Ssu2g2656 284 CDD HAD_BPGM-like 62 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2656 Ssu-Chr2 86498753 86501040 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2656 - - ccaj:109800144 484.952