Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2649 ATGGCATGTAGGGGATGCTGGGAGTGCCTTTTGAAGCTTTTGAACTTCATACTGACCCTGGCTGGTCTGGCCATGGTGGGCTATGGAATCTATCTTTTTGTTGAATTCTCTAAAGCTGAGGATGATGACACGCCGGCAATTTCTCCTGTCAGTGATGATCCTGCTCTGATTCAACTTGCCCGGCCCATGCTTATGGCTGTGCCTCTATCCAACAGCTTTTTCGATAAGTTGCCCGGTGCTTGgtttatttgcttatttattggTATTGGAGTAGTTCTCTTTGTTATTTCTTGTTTTGGTTGTATTGGAGTTGCAACACGGAATGGATGCTGCCTGAGCTGTTATTCATTTTTGGTGGTATTATTGATCTTGGTAGAGCTGGGATGTGCAGCTTTTATATTCTTTGACAAAAACTGGAAAGAAgAAATTCCGACAGACAAAACTGCAGATTTTGATATGATATATGGATTTCTGAGAGAGAATTGGAATATAGTGAAATGGGTTGCTCTTGGAATTGCTATCTTTGAGGTAAGGAAGTTGTATGATTGGCATCAGAAAGAAAGCCATATTGTTTTGCAGTCATGTGTGTGTCTTTGTGCATGTTACCCACAGATAATAGGCTCTAGGATTATAATCAAGCTATCCATTTTATAA 654 0.396 MACRGCWECLLKLLNFILTLAGLAMVGYGIYLFVEFSKAEDDDTPAISPVSDDPALIQLARPMLMAVPLSNSFFDKLPGAWFICLFIGIGVVLFVISCFGCIGVATRNGCCLSCYSFLVVLLILVELGCAAFIFFDKNWKEEIPTDKTADFDMIYGFLRENWNIVKWVALGIAIFEVRKLYDWHQKESHIVLQSCVCLCACYPQIIGSRIIIKLSIL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2649 217 Pfam Tetraspanin family 9 139 IPR018499 GO:0016021
Ssu2g2649 217 PANTHER TETRASPANIN/PERIPHERIN-RELATED 2 177 - -
Ssu2g2649 217 PANTHER TETRASPANIN 2 177 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2649 Ssu-Chr2 86422264 86424140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2649 - - gmx:100791911 321.242