Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2635 ATGGCAATGGCTGCGAATGAGAATTGCATAATCAGTGGGAACTGGAAGAAACGTGTGCACGTTTTAGGTGAGAGGGTGAGGAGATTTCCTAGTAAGGCTTGGCAGACTACGTGGAAGGTGGGACGTGAAGACCCAAGAAGGTTGATCCATGCATTCAAAGTGGGTTTGTCTCTAACTCTGGCTTCTTTGTTGTATTTGTTGGAGCCACTTTTCAATGGGATTGGGCAGAGTGCTATTTGGGCTGTCATGACCGTGGTGGTTGTGTTGGAATTCACTGCAGGGGCAACGTTATGCAAAGGGCTCAACAGAGGATTGGGGACACTGTTAGCAGGATTATTGGCATTTCTCGTTGGGTATATTGCAAATGCATCTGGCCGAGTCTCTCAAGCTGTTATCATTGGAGCTGCAGTTTTTTTTATAGGAGCTCTAGCTACTTATATGAGGTTTATTCCCTATATAAAGAAGAATTATGACTATGGTCTAGTTATATTTCTCTTGACTTTCAACCTAATTGCTGTATCGAGCTATCGGGTTGATAATGTGTTGAAGATTGCACATGACCGCGTATACACCATTGTCATAGGCTGTGCTATTTGCCTTCTGATGAGTCTACTGGTGTTTCCAAATTGGTCAGGAGAAGACCTCCATAATTCCACGGTTTACAAGCTTGAAGGCCTTGCCAAATCTATAGAAGCTTGTGTGAATGAATACTTCTACGGAGAAGTTGAAGGCTCTGAAGATATGAAATTGTCTGAGGATCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCAATTGATGAAACACTGGCATTGCATGCCAGTTGGGAACCAAGACATTCGAGGTACTGTCACAAATTTCCGTGGCAACAATATGTGAAAGTTGGAGCTGTTCTTCGTCAATTCGGTTATACTGTGGTAGCCCTACATGGCTGTTTGAGAACAGAAATTCAGaCACCACGATCTGTTAGAGCCATGTTCAAGGACCCGTGCATTCGGCTTGCAGCAGAGGTATCCAAAGTACTGATAGAACTTTCCAACAGCATAAGGAATCGCCGCCATTGCTCTCCAGAAATACTCTCTGATCATCTTCATGAAGCCTTGCAGGACCTCAACACCGCCATTAAATCTCAACCTCGCCTCTTCCTAGGCCCGAAACACAGGCACAACCAAGCCACCAATATGTTCAAAATAGCTGCTGAACAAGTTGGGCAAGGAAGACACGGAAAGACCTCCCTATCAAGCGTTAAAACTGACTCTTCAGCATTGCTAGAATGGAAAACCAAAAGGGTTTCCACTGAACAGACAAAGGAATCAGAACGGAAGTCTTTAAGGCCACAGTTAAGCAAAATTGCAATCACTAGCCTCGAGTTCTCTGAGGCTCTTCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAACAGTGGCTAAACTAGACCTTGTCATAGAGGAAGTTGAAGAACTGGGGAGATTAGCATGCTTTAAAGAGTTCATACCTGGTGATGAGGTTGTTGTGACTTGTGACGAGCCTCGAGTTGACGTGTTCCAGAACCACTTACCTTCTCATGGAGCGGACTAA 1584 0.4413 MAMAANENCIISGNWKKRVHVLGERVRRFPSKAWQTTWKVGREDPRRLIHAFKVGLSLTLASLLYLLEPLFNGIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFLVGYIANASGRVSQAVIIGAAVFFIGALATYMRFIPYIKKNYDYGLVIFLLTFNLIAVSSYRVDNVLKIAHDRVYTIVIGCAICLLMSLLVFPNWSGEDLHNSTVYKLEGLAKSIEACVNEYFYGEVEGSEDMKLSEDPIYKGYKAVLDSKSIDETLALHASWEPRHSRYCHKFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHRHNQATNMFKIAAEQVGQGRHGKTSLSSVKTDSSALLEWKTKRVSTEQTKESERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFIPGDEVVVTCDEPRVDVFQNHLPSHGAD 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2635 527 Pfam Aluminium activated malate transporter 38 491 IPR020966 GO:0015743
Ssu2g2635 527 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 522 - -
Ssu2g2635 527 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2635 Ssu-Chr2 86241008 86244558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2635 24 526 Miscellaneous Gene Families AT4G17970 64.259 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2635 - - gmx:100819748 967.992