Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2405 ATGTCCACGTCACCGTCCGGCGGGAAGGCCACGACGGTGATGATGCAGACCCTTAACTTCTACCTTTCACAGCACCCCGCGATCGTGGGGTTCCGATGGAGCCACGCCCTGTGCTGGGGCTCCACCTGGTCCTTCCTTGTCTCCTCAATCGCCGCATACGTCGTCGTATCCATTTTTCTCCACCTATTATTAGCCTTGCTTCTTCGCCGCGGCCAACCCGTTCCCCTTGGACCCTTGCCCGCGCTTCATAGCCTCTCCATGTCCCTCATCTCCGCCACCATCTTCGCCGGAATCCTTCTCTCCGCCGCCGCCGAAATCAAGGAGACACGGTGGTTCTGGCGGCGCTCCAAGACCCCGCTCCAGTGGCTCCTGTGTTTCCCCCTCGGAACCCGTCCCTCCGGTCGCGTTTTCTTCTGGTCCTACGTTTTCTACTTGTCGCGTTTCCTCCACATGCTGCGGACCGTTTTCGTGATCCTACGACGTCGTAAGCTGTTTTTTTTTCAGCTGTTTTATCTCTCCATTTCCACCTTTACGTCGTTTTTGTGGCTGGAGTTCTCGCAATCGTTCCAAGTTCTCGCGATTCTCTTCACCACGCTGGCGTGCTCCGTCACGTACGGTTACCGGTTCTGGACCGCAATCGCGGCGCGTGGGGCGTGCTTCCCGCTCGTGCTCAACTGCCAGATTGTGCTGCTTGGATGCAACTTGGTGTGTCACGTTGGAGTGCTCTTGCTGCATTTTTTTAAAGGGGGGTGTAACGGGATTGGCGCGTGGGTCTTCAATTCGGTGCTCAACGGTGCTATTTTGTTGctgtttctcaatttttatgtgagagtgtaTTTTCGAAGGGGGAGGAAGCTTAAGCGTGTCGGTGATCGTGGTGAGAACAACGTCGCTCGTTCCTGCTCTGTCTTAAGCGCCGGAAAGGAAGCAGATAGTAATACATTGAAGTCCAATTAA 957 0.5402 MSTSPSGGKATTVMMQTLNFYLSQHPAIVGFRWSHALCWGSTWSFLVSSIAAYVVVSIFLHLLLALLLRRGQPVPLGPLPALHSLSMSLISATIFAGILLSAAAEIKETRWFWRRSKTPLQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHMLRTVFVILRRRKLFFFQLFYLSISTFTSFLWLEFSQSFQVLAILFTTLACSVTYGYRFWTAIAARGACFPLVLNCQIVLLGCNLVCHVGVLLLHFFKGGCNGIGAWVFNSVLNGAILLLFLNFYVRVYFRRGRKLKRVGDRGENNVARSCSVLSAGKEADSNTLKSN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2405 318 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 11 306 - -
Ssu2g2405 318 Pfam GNS1/SUR4 family 41 285 IPR002076 GO:0009922|GO:0016021
Ssu2g2405 318 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 11 306 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2405 Ssu-Chr2 81862053 81863009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2405 11 264 Acyl Lipid Metabolism Gene Families AT4G36830 66.926 4.73e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2405 - - gmx:100782066 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2405 2 81862053 81863009 Ssu2g2405 2 81862053 81863009 ECH