Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2404 ATGGCGTTCAGGAAAACCCTCGCCCAACGACTCCTTAACGTCACCAAAGTATCGTCGCAAACCCTCACAAATTGTCGGATTTCCTCGTCCTCTGTCATCGGAAGGGTTTCGCCCAGGCCCACGGAGCCCGACGATCCCGGAGACAATGGCCTCCTCCGTTCTCCGCAACCCGCCGGAAACCTCCTCGGAAAGTTGAGAGCCATGGACATTGCCCGGAACCGGATCCGGTTGGAGGGGCTGGCGCCGCCGCCGCGGATGCGCGGCGGAATGGGGGAGACGGTGACCGTCGAGGACGCGAGGAAATTGCTAAAGGTGGCGCAGGTGGAAATGGTGAAGTCGAAGCTGAGAGAGACCCGAAAGAGTTGCATGACGTTTTCGGAGTTCGTTCGGATCTGCGCGGAAAACTGTTCGGATCAGGATCAAGCGGTGGGGATTGCCAAGATGTTGGACGATTCTGCGGCTGTGATTGTGTTGGGAGATGTCGTGTTTCTCAGACCCGAacagGTAACAAAAGCCATCCAAGGTCTACTCCACGTACCAGGAGCCAAGGTGCACGAGTCAATAAGAAAAGAATTCGAAGAAATGGAGAAAAAGAAGTTGGCTATTGACGACCGAGCCGACACCATGGTTCGCCGTGAGCTttggggcgggttgggtttctTGATGGTGCAGACAGCGGCATTCATGAGGCTCACGTTTTGGGAGCTTACCTGGGACGTGATGGAACCCATATGCTTCTATTTGACCTCAATGTACTTCATGGCTGGCTACACGTTCTTCCTCAGGACCTCAAAGGAGCCTTCCTTTGAAGGTTTCTACCAAGCCCGTTTCAGCACCAAGCAGGGGCGCCTCATGAAGCTTCATAATTTTGACATTGAAAGGTATAATCAGCTCAGGGCTGCGTGCTCTCCCACCACGTCTCCGAAGTTTGACCCGTCCATTGCTCTCCCGTTTGACAATTCTTCCAAACATCTTTGA 978 0.5266 MAFRKTLAQRLLNVTKVSSQTLTNCRISSSSVIGRVSPRPTEPDDPGDNGLLRSPQPAGNLLGKLRAMDIARNRIRLEGLAPPPRMRGGMGETVTVEDARKLLKVAQVEMVKSKLRETRKSCMTFSEFVRICAENCSDQDQAVGIAKMLDDSAAVIVLGDVVFLRPEQVTKAIQGLLHVPGAKVHESIRKEFEEMEKKKLAIDDRADTMVRRELWGGLGFLMVQTAAFMRLTFWELTWDVMEPICFYLTSMYFMAGYTFFLRTSKEPSFEGFYQARFSTKQGRLMKLHNFDIERYNQLRAACSPTTSPKFDPSIALPFDNSSKHL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2404 325 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 313 IPR039055 GO:0051560
Ssu2g2404 325 Pfam Mitochondrial calcium uniporter 139 298 IPR006769 -
Ssu2g2404 325 MobiDBLite consensus disorder prediction 31 58 - -
Ssu2g2404 325 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2404 Ssu-Chr2 81850994 81853044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2404 K20858 - gmx:100814253 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2404 2 81850994 81853044 Ssu2g2404 2 81850994 81853044 ECH