Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2403 ATGATGGGAGGTCAATCTAGTAAGACACCTAGCACTAGTGATGTTCCAACACCCATCAAAATGGGTACCCATTCTCTGTATGCGGCTGATTTAAGCTCTTATGAAGCGGCATGTGTTGAAGATCCAAACTTGCAATCCCTAGATGCTACCATTCAGGAGCGCACCAACAGGGTGATCACCTCGCTTGCTCATGGGATTGAGGTTCGTTCCATATCTATTGAGTCACTAGGGGAAGTGACTGGTAGTTTGCTTGAGATGAATCAGGATGTTGCCAAAGTCATTCTAGAGTGCAGGCAAGATATATGGAACAAGAAGGACAGGGAGTTGTTCTCCTTGGTGGAAGACTTCTTTGAAAATAGCCTCCAGACATTGGAGTTCTGCAATGCTCTTGATAAAAGCTTGAATCGAGCACGCGAAAGACATGTTATAGTTAAGTCGGCAATTACCAGTTTTGAGGAAGAGGTGCAAAATGGGGTTGAAGGGTCCACTTATTTGAAGACATTGCAAGAGCTTAAGGGTTTCAAGGAAGCCGGGGACCCCTTCACAGAAGAGTTTTATTCCTTCTTTCAGGCAGTTTATCAAAAGCAAGCATCAATGCTGAAGAAATTGCAAATCAGGAAGCAAAAGCTTGATAAGAAATTGAAGTCCCTCAAGACATTGAAGAGGGTGTCAAATGCCATTTTCTTGGCTGCTTTTGTGTCTGTGTTGATTTTCTCGGTGGTCGCAGCTGCCGTTGCTGCACCACCTGTTGTAACTGCTTTGGCTGGTGCATTGTCTGTTCCAATAGGCTCAGTGGGGAAATGGTGCAACTCTCTTTTTAAGCGATATGAGACAGCTTTAAAGGGCCAAAGAGAATTAATCGGTTCGATGCAGGTTGGTAGTTACATTACATTGGTGGACTTGAAGAACATTCGGGTGTGCATCGACCAATTGGAAATAAAGATTGAATCCATGTTGCAGAGTGCTGATTATGCTCTTAGAAATGAGGATGCTGTAAGGTTTGCAATCGATGAGATTAAGAAGAATATAGACACTTTTGCGGAGACCATTGAAGCTTTGAGTAAGCAAGCTGATGAGTGTAGTCGGCAGATAAGGAGAACAAGGACGGTGGTTGTgaaaaagattattaattatactagttAA 1143 0.4269 MMGGQSSKTPSTSDVPTPIKMGTHSLYAADLSSYEAACVEDPNLQSLDATIQERTNRVITSLAHGIEVRSISIESLGEVTGSLLEMNQDVAKVILECRQDIWNKKDRELFSLVEDFFENSLQTLEFCNALDKSLNRARERHVIVKSAITSFEEEVQNGVEGSTYLKTLQELKGFKEAGDPFTEEFYSFFQAVYQKQASMLKKLQIRKQKLDKKLKSLKTLKRVSNAIFLAAFVSVLIFSVVAAAVAAPPVVTALAGALSVPIGSVGKWCNSLFKRYETALKGQRELIGSMQVGSYITLVDLKNIRVCIDQLEIKIESMLQSADYALRNEDAVRFAIDEIKKNIDTFAETIEALSKQADECSRQIRRTRTVVVKKIINYTS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2403 380 Coils Coil 336 363 - -
Ssu2g2403 380 PANTHER UPF0496 PLANT-LIKE PROTEIN 2 378 - -
Ssu2g2403 380 PANTHER UPF0496 PROTEIN 3-RELATED 2 378 IPR007749 -
Ssu2g2403 380 Gene3D - 107 373 - -
Ssu2g2403 380 Pfam Protein of unknown function (DUF677) 44 375 IPR007749 -
Ssu2g2403 380 Coils Coil 193 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2403 Ssu-Chr2 81833755 81834897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2403 - - gmx:100819451 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2403 2 81833755 81834897 Ssu2g2403 2 81833755 81834897 ECH