Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2398 ATGAACACAACACAGATTTTTGGCGTGTCTCTCTCGCTCATTCTTATCAACCTGGCTGCTATTATGGAGCGCGCAGATGAAAACCTTCTTCCATCTGTCTACAAAGAAGTTAGTGAAACATTTAATGCCGGACCATCTGATTTGGGTTACCTCACATTCATAAGGAACTTTGTTCAGGGATTGTCATCTCCTCTGGCTGGTATACTTGTTATCAACTATGATCGCCCAACAATTCTTGCTATGGGCACTTTCTGCTGGGCTTTATCTACAGCTGCTGTGGGTGTTTGCCACAATTTTCTGCAGGTTGCATTCTGGAGAGCAATAAATGGCTTTGGTTTGGCAATTGTGATTCCTGCGCTCCAGTCTTTCATTGCTGATAGCTACAGGGATGGAGTGAGAGGAACTGGGTTTGGATTGCTGAGTCTCATTGGCAACTTAGGAGGCATAGGAGGTGGTGTTTTGGCTACTGTCATGGCTGGCCAACAGTTTTGGGGCATACAAGGATGGCGATGTGCCTTCATTTTGATGGCAACTTTGAGTGCAGTAATTGGATTCCTTGTTTTACTATACGTTGTTGACCCAAGAAAAAGATCTCCCACCACTCGTGATGCTGGTGAGAGTTCAGACAGGGATGAATCTATCTATAAAGACAATGCTAGTGCAGCATCAATTTGGACGGATTCTTGGGCAGCCACGAAAGCAGTGATCAAAGTGCAAACATTTCAAATAATTGTCTTACAGGGTATTGTTGGGTCACTGCCATGGAGTGCCATGGTGTTCTTCACGATGTGGTTCGAACTAATTGGTTTTGATAACAATACTGCAGCAACCCTACTGAGTCTTTTTGCTATTGGATGTGCTATGGGCTCCTTCATTGGTGGATCAATAGCTGATCAATTATCACAAGTCTACCCTCATTCTGCTCGTATCATGTGCGCACAGTTTAGTGCCTTTATGGGCATTCCATTCTCATGGTTTCTTCTTACGGTGATCCCTCAGTCAGTAAGTAGTTTTCTTACCTTTTCTGTCACCCTCTTTATAATGGGTCTAACTATCAGCTGGAATGGTTCGGCTGCAAATGCTCCTATGTTTGCTGAGGTAGTCCCTGTCAAACACCGTACCATGATTTATGCATTTGATCGAGCTTTTGAAGGCTCGTTTTCTTCTGTTGCGGCTCCTCTGGTAGGGATTCTTTCTGAGAAAATGTTCGGTTATAACTCAAAGTCTGTTGATCCCATCAAAGGATCTTCACCAGAGGCTCTTGCCTTGTCGAAGGGCCTTCTTTCAATGATGGCTGTTCCCTTTGGATTGTGCTGTTTATGCTACACCCCTCTATATTACACATTTAAGCGGGACCGTGAAAATGCTAGAATGCTTGCTGTGAAAGAGGAGGAGGTGAGGTGA 1404 0.443 MNTTQIFGVSLSLILINLAAIMERADENLLPSVYKEVSETFNAGPSDLGYLTFIRNFVQGLSSPLAGILVINYDRPTILAMGTFCWALSTAAVGVCHNFLQVAFWRAINGFGLAIVIPALQSFIADSYRDGVRGTGFGLLSLIGNLGGIGGGVLATVMAGQQFWGIQGWRCAFILMATLSAVIGFLVLLYVVDPRKRSPTTRDAGESSDRDESIYKDNASAASIWTDSWAATKAVIKVQTFQIIVLQGIVGSLPWSAMVFFTMWFELIGFDNNTAATLLSLFAIGCAMGSFIGGSIADQLSQVYPHSARIMCAQFSAFMGIPFSWFLLTVIPQSVSSFLTFSVTLFIMGLTISWNGSAANAPMFAEVVPVKHRTMIYAFDRAFEGSFSSVAAPLVGILSEKMFGYNSKSVDPIKGSSPEALALSKGLLSMMAVPFGLCCLCYTPLYYTFKRDRENARMLAVKEEEVR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2398 467 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 466 - -
Ssu2g2398 467 ProSiteProfiles Major facilitator superfamily (MFS) profile. 12 444 IPR020846 GO:0022857
Ssu2g2398 467 Pfam Major Facilitator Superfamily 18 356 IPR011701 GO:0022857|GO:0055085
Ssu2g2398 467 CDD MFS_spinster_like 13 442 IPR044770 -
Ssu2g2398 467 SUPERFAMILY MFS general substrate transporter 12 455 IPR036259 -
Ssu2g2398 467 Gene3D MFS general substrate transporter like domains 9 201 IPR036259 -
Ssu2g2398 467 Gene3D MFS general substrate transporter like domains 236 464 IPR036259 -
Ssu2g2398 467 PANTHER SPINSTER 3 466 IPR044770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2398 Ssu-Chr2 81771438 81775250 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2398 - - gmx:100812646 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2398 2 81771438 81775250 Ssu2g2398 2 81771438 81775250 ECH