Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2396 ATGGTAACAGCAAAGCCTCACGCAGCACTTCTGGCCAGCCCCGGCATGGGGCACTTAATTCCCATGGTGGAGCTAGGCAAGCGCCTCCTCACTCATCACGCCTTCCACGTCACCATCTTCGTCGTAACCACCGATTCCTCAACCGCAACCTCTCAGATTCTCCAACAAACGTCCAACCTTAGCTCCCTCAACATCGTCCTAGTCCCTCCCCTCGATGTCTCCAACAAACTCGGACCCAGCCCAACGTTATCCTTTCGAATTCTGTCAACCATGCTCGACTCCCTACCCTTTCTACGCTCTTCCATTCTGTCCATGAACCTTCCTCCTCCTTCAGCTCTCATCGTCGACATGTTCGGTATCGTAGCCTTTCCCATGGCACGTGACCTCGGCATGCTAACCTACGTTTTCTTCGCCACCAGCGCGTGGTTCTCTGCGGTGACCCTATACTTCCCTGTCATGGACAAGCAAATAGTAGAAAGGCATGCGCACAACCACGAACCGCTCATGATTCCGGGTTGCGAACCGCTTCGGTTCGAGGACACGCTCGAATCGTTTTTATCTCCGGGCGGGGACATGTACGAGGGTTACCTTAAAGCAGCAAAGGAGATAGTAACCGCGGACGGGATCCTGATAAACACGTGGCAAGATCTGGAGCCCGCTGCGACGAAGGCGGTTAGAGAACATGCGATTTTGGGACGGTTTACGAAGGGAGCGGTGTATCCGGTTGGACCGCTGGTGAGAACAGTAGAGGCGAAACCGGAGCATGGGGAAAAGGGTGCGGTTTTGCGTTGGCTGGACGGGCAACCGGCTGAGTCAGTGATCTACGTGTCGTTCGGGAGCGGTGGGACCATGTCAGAGGGTCAAATGAGGGAAGTGGCTTTGGGGTTAGAGCTGAGTCAGCAGAGGTTTGTCTGGGTGGTGCGGCCACCCAGCGAAGACGCGAGTGGCTCGTTTTTCGACGTGGCGAACGGCGGTGACGGTTCGCTGAATTACTTGCCAGAAGGGTTTGTGGAAAGGACAGAAGGGGTGGGGGTTGTGGTCCCCATGTGGGCCCCCCAGGCTGAGATTCTGGGACATCCTTCGACGGGTGGTTTCGTCACGCACTGCGGTTGGAATTCCGTTTTGGAGAGCGTCCTCAACGGGGTTCCCATGGTGGCGTGGCCGCTTTACGCGGAGCAGAAAATGAACGCTTTTGTGTTGTCGGAGGAGGCTGAGGTGGCGGTGCGCGTGGCGGAGGAGGAAGGAGTTGTGCGCCGGGAAGAGGTAGCGGAGCTGGTGAGAAGAGTGATGTGGATGAAGAAGGTGTTGCTATGA 1314 0.5647 MVTAKPHAALLASPGMGHLIPMVELGKRLLTHHAFHVTIFVVTTDSSTATSQILQQTSNLSSLNIVLVPPLDVSNKLGPSPTLSFRILSTMLDSLPFLRSSILSMNLPPPSALIVDMFGIVAFPMARDLGMLTYVFFATSAWFSAVTLYFPVMDKQIVERHAHNHEPLMIPGCEPLRFEDTLESFLSPGGDMYEGYLKAAKEIVTADGILINTWQDLEPAATKAVREHAILGRFTKGAVYPVGPLVRTVEAKPEHGEKGAVLRWLDGQPAESVIYVSFGSGGTMSEGQMREVALGLELSQQRFVWVVRPPSEDASGSFFDVANGGDGSLNYLPEGFVERTEGVGVVVPMWAPQAEILGHPSTGGFVTHCGWNSVLESVLNGVPMVAWPLYAEQKMNAFVLSEEAEVAVRVAEEEGVVRREEVAELVRRVMWMKKVLL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2396 437 CDD GT1_Gtf-like 6 410 IPR002213 GO:0008194
Ssu2g2396 437 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 406 IPR002213 GO:0008194
Ssu2g2396 437 PANTHER GLYCOSYLTRANSFERASE 3 432 - -
Ssu2g2396 437 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Ssu2g2396 437 PANTHER UDP-GLYCOSYLTRANSFERASE 72C1 3 432 - -
Ssu2g2396 437 Gene3D Glycogen Phosphorylase B; 7 243 - -
Ssu2g2396 437 Gene3D Glycogen Phosphorylase B; 259 432 - -
Ssu2g2396 437 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2396 Ssu-Chr2 81722559 81723872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2396 1 430 Glycosyltransferase AT3G50740 50.572 3.38e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2396 K12356 - gmx:100781979 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2396 2 81722559 81723872 Ssu2g2396 2 81722559 81723872 ECH