Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2267 ATGTCTCACTCTCACCCCTTACCCCTCAAGAGACAAGGTGAACACTTGTCCGATGATGGCGTCTCTGCCATTAAACCTTCACGCCTCAAAATCGCAATACCCTCTGAGGATACCGACAAGAAGAATGCGAACAGGAGGCTCAAAGATGTTGAAATTTGCGTCCCAATAGTGTATGGGACCATTGCATTCTATCTTGGAAGGAAGGCCAGTGAGTCTCAGTCACATAAGTGGACGGTATATGTGCGTGGAGCCACGAATGAAGATCTTGGGGTGGTGATTAAGCGGGTTGTGTTTCAATTGCATCCCAGTTTTAATAACCCCACTAGAGTTGTTGAGTCACCACCGTTTGAGTTGTCAGAATGCGGTTGGGGTGAATTTGAAATAGCCATCACTCTCTATTTCCACAGTGATGTCTGTGAAAAACAGTTGGATTTGTATCACCATTTGAAATTATACCCAGAAGATGAATCTGGTCCCCAGTCTACGAAGAAACCTGTGGTTGTTGAATCTTATAACGAGATTGTTTTTCCTGAACCCTCGGAGGGTTTTCTTGCACGTGTACAGAATCATCCTGCTGTTAATGTGCCTAGGCTTCCTGCTGGTTTGAATTTACCAAGTCCTGTACCGATTGATACTACGAATGACAAGGAGAGAGGTGACACCAAAGATCATCCTCTTAGCCAATGGTTCATGAACTTCTCTGAGGCTGATGAGCTCTTAAAACTTGCAGCAGCTCGCCAGCAGGTGCAAGCTCATATTGTTAAGCTGCGAAGACAATTAAGTCTGGTGGAAGGACTACCTCAGCTGCCAAAACCACCCTCTGGTTATGAATgtacatga 840 0.4488 MSHSHPLPLKRQGEHLSDDGVSAIKPSRLKIAIPSEDTDKKNANRRLKDVEICVPIVYGTIAFYLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEFEIAITLYFHSDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPSEGFLARVQNHPAVNVPRLPAGLNLPSPVPIDTTNDKERGDTKDHPLSQWFMNFSEADELLKLAAARQQVQAHIVKLRRQLSLVEGLPQLPKPPSGYECT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2267 279 CDD YEATS_TFIID14_like 52 183 - -
Ssu2g2267 279 Gene3D YEATS domain 47 199 IPR038704 -
Ssu2g2267 279 ProSiteProfiles YEATS domain profile. 46 190 IPR005033 GO:0006355
Ssu2g2267 279 MobiDBLite consensus disorder prediction 1 20 - -
Ssu2g2267 279 MobiDBLite consensus disorder prediction 204 223 - -
Ssu2g2267 279 Pfam YEATS family 73 153 IPR005033 GO:0006355
Ssu2g2267 279 PANTHER YEATS DOMAIN 25 269 IPR005033 GO:0006355
Ssu2g2267 279 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 25 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2267 Ssu-Chr2 79483631 79485900 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2267 K11341 - gmx:100819921 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2267 2 79483631 79485900 Ssu2g2267 2 79483631 79485900 ECH