Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2243 ATGGcttctcaaaaccctaatcAAAGAAATCCCCTGTACCCGCAAGTAATCGATTCTAACCCCGATGCTCCCTCACCACTCCTTCACCCCAGTCGCTCGTCCAATCTCTACCCTTCCATCGACTACAACGACCTCGTCGAAAACCTCTTCACCGATGACGCCACCGCCGCAGGCTCCCCCTCCGCACCGCCGGAGGCCACCGAGGAGGTCCTCCTCAGGATCCCCGGCGCCATCCTCAACCTCGTCGACAGGGACTACAGCGTTGAACTCGCGTGCGGCGATTTCTCCGTGATTCGCCTCCGGCAGGGCGATAACGCCGTCGCCGTGTACGCCCGCGTCGCCAACGAGATCCAGTGGCCACTGGCGAAGGACGAGACCGCAGTGAAAGTTGACGATTCGCACTACTTCTTCTCCTTCCGCGTCCCCGATCCCGACGAGGAAGAGGATTTGCTGAGCTACGGGTTGACGATCGCGTCGAAGGGGCAAGAGGGGTTGCTGAAGGAGCTGGACGCGGTTTTGGAGCACTGCAGTTGCTTCTCCGTGCAGAGGGTTTCGGAGAAGGCGAAGAAGAAAGGGGAGGCTCTGGACGGTTCGGTGGCGAAGGAGGTTTCGCCAAAGGACTTGGAGTcggagaagaagaaggagatgaTGGAGGGGCGGTGCGCCGCGTATTGGACCACGCTGGCCCCCAATGTGGAGGATTATAGTGGAACTGCTGCGAGGATGATCGCTGCGGGGTCTGGACAGGTGGTTAAGGGGGTTTTGTGGTGTGGGGATGTGACCGTGGAGAGGTTGAAATGGGGGAATCAGGTTATGAAGAAGAGGATCAGTCCGGGTTCACATGCTGAGGTTAGTCCTCAGACCTTGAAGCGGATTAGAAGGGTTAAGAGAGTTACTAAAATGACACAAAAAGTAGCAAATGGTTTCCTCTCTGGGGTCGTGAAAGTGTCTGGATTTTTCACCAGTTCAGTGGTAAACTCAAAAGCGGGAAAGAAATTTTTCAGCCTTCTACCAGGGGAAGTTGTGCTTGCATCATTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTAGCTGGAAAAAATGTCATGTCAACGTCATCCACTGTGACAACTGAGCTTGTCGATCACAGATATGGAGAACAAGCAGCTGAAGCAACAAGTGAAGGGTTTCGTGCTGCTGGTCATGCTCTGGGTACTGCATGGGCTGCTTTTAAGATTAGGAAGGCTATCAACCCTAAGAGTGTTCTTAAACCTACCACCCTGGCCAAAGCTGGTGCTAAAGCTGCAGCTTCTGAATTTAAGGCTAAAAATTCCAAGTAA 1323 0.5223 MASQNPNQRNPLYPQVIDSNPDAPSPLLHPSRSSNLYPSIDYNDLVENLFTDDATAAGSPSAPPEATEEVLLRIPGAILNLVDRDYSVELACGDFSVIRLRQGDNAVAVYARVANEIQWPLAKDETAVKVDDSHYFFSFRVPDPDEEEDLLSYGLTIASKGQEGLLKELDAVLEHCSCFSVQRVSEKAKKKGEALDGSVAKEVSPKDLESEKKKEMMEGRCAAYWTTLAPNVEDYSGTAARMIAAGSGQVVKGVLWCGDVTVERLKWGNQVMKKRISPGSHAEVSPQTLKRIRRVKRVTKMTQKVANGFLSGVVKVSGFFTSSVVNSKAGKKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGFRAAGHALGTAWAAFKIRKAINPKSVLKPTTLAKAGAKAAASEFKAKNSK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2243 440 Pfam Senescence domain 242 427 IPR009686 -
Ssu2g2243 440 PANTHER SPARTIN 147 440 IPR045036 -
Ssu2g2243 440 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 147 - -
Ssu2g2243 440 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 147 440 - -
Ssu2g2243 440 PANTHER SPARTIN 1 147 IPR045036 -
Ssu2g2243 440 MobiDBLite consensus disorder prediction 1 15 - -
Ssu2g2243 440 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2243 Ssu-Chr2 78958901 78965366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2243 K19366 - gmx:100804971 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2243 2 78958901 78965366 Ssu2g2243 2 78958901 78965366 ECH