Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2239 ATGGGTTGCTGCTACTCCAAAATAGAGAGGGAAGAAACGGTGTCGCATTGCAAAGACAGAAAGCGTTACATGAAGCAGTTCGTGCAAGCCAGACACGCTTTTTCCGCGGCGCATGTTATGTACATTCGCTCGCTTCGTGCCACTGGTTCTGCGCTCTTTCGGTTTGCAAACGCCGAAACCACGGCTCTTCACCACGACAGCTACCACCTTCCGCCGCGGCCTCCGCCCATTCTCCCCCCGCCGCCGCCGAGAATCCCCACCCCGATGCCGCCGCCGATGAGTCCGAGTTCCTACACGTGGACGTCGGACACTACCTCCTCCCCGGCTCTTCCccctccgccgccgccgccgccggtGGCGTCCTCCGCCTGGGATTTCTGGGACCCGTTTGTGCCGCCGGCGGCTTCTCGGTCGGCGACGGAGGAGGAGTGGGAGGCGACGACCACCGCGGGCTCGGAGGTGGTGCTGATGGCGGCGGCGAGCGTGACGGCTCCGCCGTCGGTGGTGAGCGGGTTTTCCAAGGAGACCCCTAGTGAGCTTGCAATGGTGGTGTCAAGGAACACTAAGGATCTCGTTGAAGTTGTTAAAGAGCTTGATGACTATTTTCTCAAAGCTGCTGATGCTGGTTCACACGTTTCTTTGCTCCTTGAAGTTCCAAGCTCTGGATTTTCTGATAACAGTAAAGCATGTAAAGTGCACAGCTATGGGTGGAGTTTGAGTCCATCGATGTGGGCCTGGGGTTCGAGTCCTAAGCAGAACGGGTTTGGCAAGCTGGCTGAGGGGACTCCTGTTTCTGTTGGTACTTTTGGGGCTAATGGAGTTGGCAGTGTTGGGCACTGCTCCACTGTGGAGAGGCTATATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGAATGCTAAGACTGTAAAGATGGAGCATGAGAAGAAGGTGGCACTGCTGAGGAAGGTGGAGATGAAGAGAGCTGACTATGTGAAGACAGAGAAGACAAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCTCAGGCCATTGATAGTACATCTGCTGAAATCATCAAATTAAGGGAGGTAGAGCTCTACCCTCAACTCATTGAGCTTGTCAAAGGATTAATGTGCATGTGGAGAGGCATGTATGAGTGCCACCAAGTCCAAAAGCACGTAGTTCAGCAACTAGAGTACCTCAATACCTTACCATCAAACAACCCCACATCAGAGATTCACAGGCAGTCAACTCTTCAGCTGGAGCTTGAAGTGCAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCCCACCGCGACTATATCCAATCCCTCACAAGTTGGCTAAGGCTAAGCCTTTTCCAGTTCAGCAAAAACCCTCTAAGCAGAACCCCTGAAGAGTCAAAGATATACTCTCTCTGTGAAGAATGGCACCTAGCTGTTGACCGTATTCCAGACAAGGTAGCATCCGAAGGAATAAAAAGCTTGTTGACAGTTATTCATGCCATTGTAGTGCAACAGGCAGAAGAGtacaaacaaaagaagaaatcgGCTTCTGCATTCAAAGAGCTTGAGAAGAAGGTGGTTCAGCTTCGGTCCTTGGAGTGCAAGTATGGTCCATACTCCATGCCAGAATCCTCTGGTAGCATGAGAACCAAGGACCCCCGTCACTGA 1668 0.5042 MGCCYSKIEREETVSHCKDRKRYMKQFVQARHAFSAAHVMYIRSLRATGSALFRFANAETTALHHDSYHLPPRPPPILPPPPPRIPTPMPPPMSPSSYTWTSDTTSSPALPPPPPPPPVASSAWDFWDPFVPPAASRSATEEEWEATTTAGSEVVLMAAASVTAPPSVVSGFSKETPSELAMVVSRNTKDLVEVVKELDDYFLKAADAGSHVSLLLEVPSSGFSDNSKACKVHSYGWSLSPSMWAWGSSPKQNGFGKLAEGTPVSVGTFGANGVGSVGHCSTVERLYAWEKKLYQEVKNAKTVKMEHEKKVALLRKVEMKRADYVKTEKTKKEVEKLESQMMVASQAIDSTSAEIIKLREVELYPQLIELVKGLMCMWRGMYECHQVQKHVVQQLEYLNTLPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIQSLTSWLRLSLFQFSKNPLSRTPEESKIYSLCEEWHLAVDRIPDKVASEGIKSLLTVIHAIVVQQAEEYKQKKKSASAFKELEKKVVQLRSLECKYGPYSMPESSGSMRTKDPRH 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2239 555 PANTHER UNCHARACTERIZED 1 541 - -
Ssu2g2239 555 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Ssu2g2239 555 MobiDBLite consensus disorder prediction 66 122 - -
Ssu2g2239 555 Coils Coil 327 354 - -
Ssu2g2239 555 MobiDBLite consensus disorder prediction 69 95 - -
Ssu2g2239 555 Pfam Protein of unknown function (DUF632) 191 499 IPR006867 -
Ssu2g2239 555 MobiDBLite consensus disorder prediction 107 122 - -
Ssu2g2239 555 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2239 Ssu-Chr2 78876178 78879522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2239 1 98 Acyl Lipid Metabolism Gene Families AT2G27090 29.703 3.73e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2239 - - gmx:100808077 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2239 2 78876178 78879522 Ssu2g2239 2 78876178 78879522 ECH