Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2238 ATGGAAGGCCAACTTAAAAGATCAAGAAGACTAGAAACTCAGCAGCAGGAACAGTCAAGGGCTAGGTGGACGACATCACTAACTAAGATACTTGCACAGCTTATGATTGACCAAGTACATAAAGGGAATAAACACTGCAATTTATTCAATAAGAAAGCATGGAAATATATTTGCGATgaattttacaacaaaacagGTCTGAAATGGGACAAGGAACAGCTCAAAAACCGATATTCGGTCTTGAGGAGGCAGTATGCTATTGTAAAGTCCATTCTTGATCAAAGTGACTTTAGTTGGGATGAAGCCACAGGATCTATAACAGCTAATGATGAAATTTGGGCTGAATACATCAAGAAACACCCCGATGCTGAGACTGTCAAAACCGGTGGCTGCTCGATCTTTAAGGAACTTTGCACAATATTTTCTGAGCCAGAAACCAATGGCAAGCATGAACATTTAGCTGCATCTGAGGGTGAACATACTTCCAGAACTCTTTGTCCAGAGCCCTTGAACATACACCAAGAGGAGTCCTCATCCGAATCCCAGGATGAGGAAGATGCTAATGACCCTCAAACAGTTCAACCTACTGCAACTTGTACCCGGAAAAGAGGGCGTAAAGGAATTGATGATGCTATTGCAGATGCCATATTTGAGATGGCATCTGCTTCAAAAATGAGGGCAGCTGCCATAGAGCAACAAAATGCTAGATTTAGCATTGCTGACTGTATTAGGGACTTAGATTTGATGCAAGGTGTTGATCAACAACTGTATTTTGCTGCTCTAGATCTGTTCAACAAACCTAATGCAAGGGAGATATTTTTGTCCCTCAAAAAGGATAAACGTTTAACTTGGTTGCAGGGTAAGTGTGCTGTTGCATCCAGTTAA 885 0.4068 MEGQLKRSRRLETQQQEQSRARWTTSLTKILAQLMIDQVHKGNKHCNLFNKKAWKYICDEFYNKTGLKWDKEQLKNRYSVLRRQYAIVKSILDQSDFSWDEATGSITANDEIWAEYIKKHPDAETVKTGGCSIFKELCTIFSEPETNGKHEHLAASEGEHTSRTLCPEPLNIHQEESSSESQDEEDANDPQTVQPTATCTRKRGRKGIDDAIADAIFEMASASKMRAAAIEQQNARFSIADCIRDLDLMQGVDQQLYFAALDLFNKPNAREIFLSLKKDKRLTWLQGKCAVASS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2238 294 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE 1 293 - -
Ssu2g2238 294 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR024752 -
Ssu2g2238 294 MobiDBLite consensus disorder prediction 173 204 - -
Ssu2g2238 294 PANTHER - 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2238 Ssu-Chr2 78869895 78871925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2238 - - gmx:102661909 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2238 2 78869895 78871925 Ssu2g2238 2 78869895 78871925 ECH