Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2234 ATGTGTTTATTAGACCCCTTGTGGCTCTGGCTAATGTTAATGGTTCTAGTTTCCGCTGTCTATGTTATCCCATTTCCTTGTTCATTGGGCTGTGTATTATGTTCCCAGGTTGATTCTTCAGTGGGTGGCAAAACCGGGATAAATCATCGCCTTGGGAAGAACCTGATCGGTGCCTTTTACCAACCTCAGTGTGTGCTTATAGACACGGACACATTAAATACATTACCAGATAGGGAACTGGCATCAGGACTTGCAGAGGTTATAAAGTATGGCCTCATTAGGGATGCAGAATTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTAATAGCAagAGATCCTAATGCACTGGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCCTTAGATGAGAGGGAAAGTGGACTGAGGGCAACGTTGAACTTGGGTCATACATTTGGTCACGCAATAGAAACTGGGGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGCAcgGTAATGGCTGTTGACATGTCATATCGCCTAGGCTGGATTGATGATTCTATTGTGAAGCGAGTTGGAGACATTTTAAAACAGGCTAAGTTACCTACAGCCCCTCCTGAGACCATGACTGTGGACATGTTTAAATCTGTCATGGCGTTCATTTATTTTGGTATATCAGGTGATAAGAAGGTAGCAGATGGGTTGCTAAGGCTTATCCTTCTAAAGGGTCCTCTAGGCAATTGCGTTTTCACCGGGGATTATGATAGAAAGGCCCTAGACGATACACTTTGCGCATTCTGTAAATCCTGA 819 0.4396 MCLLDPLWLWLMLMVLVSAVYVIPFPCSLGCVLCSQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMQALIARDPNALAYAIKRSCENKAEVVSLDERESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVGDILKQAKLPTAPPETMTVDMFKSVMAFIYFGISGDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLCAFCKS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2234 272 Pfam 3-dehydroquinate synthase 32 221 IPR030960 -
Ssu2g2234 272 SUPERFAMILY Dehydroquinate synthase-like 33 261 - -
Ssu2g2234 272 Gene3D - 20 74 - -
Ssu2g2234 272 PANTHER 3-DEHYDROQUINATE SYNTHASE 33 266 - -
Ssu2g2234 272 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 33 266 - -
Ssu2g2234 272 Gene3D - 75 269 - -
Ssu2g2234 272 CDD DHQS 35 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2234 Ssu-Chr2 78786065 78788544 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2234 K01735 - gmx:100812989 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2234 2 78786065 78788544 Ssu2g2234 2 78786065 78788544 ECH