Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2179 ATGATGGATACTCACGTGGAAGATTCTGCTAGACCTGAGGAGCATTTGCCTGAAGTGAATCATCATTATGAAGATGGAAGCAATGGGAATCTTCTATTGGAAAATGGTTTGTCTGATGGCAATCAAGGTCCGGCTGATACTCACGATCAACTTCTACAAATGGTTATGGACCTCAGGTTTCAGAATGACTTCTTGAGGTCCCAGTTTGACGGATTTAGAAATGTAAACAATGTACATAGTGACTCTAGTATACAAAAAGGAGTTGATGACTTGGCAGAGAGGGAATCTAACATTGAGAAAGAACTACAGGAAAGGATAGAATTGTTAAATAAAGAATTTctggaaaaaaaacaaacaagaattGCATCAGAAGAGGCTTTGAAGCATCTTCAAACAGCATACTCAGAGGCAGAAGCAAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTGGACCAAGAAATAAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATCTCGAGGCACGCTTCTCTGAGGTGAATGAAATTGCGGAGCGAGCATCATCCCAACAGTCAGCACTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAACCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAGTGCTCTTGAGGCATTGCAGCAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGATTGCTTCAGGCTGCTGACGAAAAAAGGCAAGCTGCACTAGCTGAGCTCTCAGCTAAACACCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGACGCATTGTCCGATAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACTGGGGAAGCAGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTTCGTACCTAAAAGAGGAGCGTgaaaaagaaagggaaagcTGGGAGACTGCTTCTCAGGCACTTAAAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACATGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCGCTCAAACAAGAATCCTCAATATGAGAGATGCCAAATTGTTGGCTGCCAAAGAAGAGATCAGTTCTCTTGAGAAGGAATTTTCTTCATACAAGGTTCGTGCACATGCACTTCTTCAAAAGAAGGATACTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTTTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTATTGTCAATAACGGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAGTCATGAGAAAGAACTTGCAGAAAGAGACACAGTCCTTGAAAATGCCAAGCAAAAGATAAGGAACTTAGAAATAAAGCTTGACTCAGCTAATGTTCAGCAcctaaaagagaaagaggaatgGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAGATGCGAGGCAATGAAGGCTGAAAATGAAGCAACTGCCACGAAAGATATGCAAAAGGAATTGGAAGAGCTCAGACAGCGATGTAAAAAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGATATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCACCAGTCgatcaaaatgataattatacaacagCATTGCATAAATTGGATTCAACGAATTTAAGCCCCTCAGCTGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACAATCACAGCGCCATATTTTAGCTCTGCAAGAAGAAATTGAGGAGCTTGAGCGTGAGAATCGTCTCCACAGCCAACAGGAGGCAATGCTAAAGGCTGAGCTTCGCAACGTGGAAAGATCAAAGAAAAGGGAAGGTGTAGATATGAcatatttgaaaaatgttatcTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTACTCCCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAGGCATATCACAACTCAACAGATGTTCCACCCACTCCTGCAAGCGATACTTCAGGATCTGGCCTATCACTATTCTCAAGATTCTCATTTTCATAA 2379 0.3997 MMDTHVEDSARPEEHLPEVNHHYEDGSNGNLLLENGLSDGNQGPADTHDQLLQMVMDLRFQNDFLRSQFDGFRNVNNVHSDSSIQKGVDDLAERESNIEKELQERIELLNKEFLEKKQTRIASEEALKHLQTAYSEAEAKAQELSEKLAEAQTKLDQEIKEREEKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLRRSLQPKESALEALQQSLAEKEQMLEDMRGLLQAADEKRQAALAELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELSYLKEEREKERESWETASQALKAKLEIAESNCIHAEVEVAKIRSQLESEVSAQTRILNMRDAKLLAAKEEISSLEKEFSSYKVRAHALLQKKDTELAAAKDSEQLKALEETLKEVENEVLSITEERDRVLQDLQSAMASHEKELAERDTVLENAKQKIRNLEIKLDSANVQHLKEKEEWGLSLQNVEETWRIRCEAMKAENEATATKDMQKELEELRQRCKKLKEEHASFHDLADRMIEEKDYDISRLLDENKNLRQSLQSRPPVDQNDNYTTALHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAMLKAELRNVERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEMQKCQQAYHNSTDVPPTPASDTSGSGLSLFSRFSFS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2179 792 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 52 769 - -
Ssu2g2179 792 Coils Coil 667 708 - -
Ssu2g2179 792 Coils Coil 354 399 - -
Ssu2g2179 792 SMART 1grip 719 763 IPR000237 -
Ssu2g2179 792 Coils Coil 425 452 - -
Ssu2g2179 792 Coils Coil 564 601 - -
Ssu2g2179 792 Coils Coil 127 349 - -
Ssu2g2179 792 Pfam GRIP domain 720 759 IPR000237 -
Ssu2g2179 792 Coils Coil 459 500 - -
Ssu2g2179 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 52 769 - -
Ssu2g2179 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Ssu2g2179 792 Coils Coil 91 119 - -
Ssu2g2179 792 MobiDBLite consensus disorder prediction 1 22 - -
Ssu2g2179 792 Coils Coil 505 546 - -
Ssu2g2179 792 MobiDBLite consensus disorder prediction 762 781 - -
Ssu2g2179 792 MobiDBLite consensus disorder prediction 1 29 - -
Ssu2g2179 792 Gene3D - 153 307 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2179 - - gmx:100775990 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2179 2 77898571 77910775 Ssu2g2179 2 77898571 77910775 ECH