Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2159 ATGGCTGGTACCGGCAAATGCTTCCTCGTCACGGGTCCTCCAGGCGTGGGAAAAACCACTCTTATTATGAAAGTGTTGGAGTCCCGTAGAGTCAATCCCTCCCTCAAGCTTCAGGGCTTCTACACTCGCGAAGTTAGGCGCGCGGGTCAGAGGGTTGGTTTCGAAGTGGTCACTCTCGATGGTCGCACCGCCCCACTTGCCTCCCTCAACATTTCAACCCCTGAGTCTCTGAGATGGCCTAGTGTTGGCAAGTATAAAGTTGATGTAGCATCCTTCGAGTCCCTAGCACTGCCCGAGTTACAGGTTAGAGAAGGTACCGATCTCTTCATCATTGACGAGGTTGGTAAGATGGAGTTATTCAGTTCGTCATTCTTCCCTGCAGTTCTAAGAGTTTTGGAGTCAAATATCCCAGTTTTGGCCTCCATTCCAATTCCAAAATTCGGCAGGGACATACCTGAAGTTGCAAGGTTGCGGAATCATGCAGGGGCAACTTGTTTTATGCTGAGCGTTAGTAACAGAGATGCTGTTGGAGAACAGATACGCTCACTATTGGAAGATCTGTTGATAAAACACTAG 576 0.4896 MAGTGKCFLVTGPPGVGKTTLIMKVLESRRVNPSLKLQGFYTREVRRAGQRVGFEVVTLDGRTAPLASLNISTPESLRWPSVGKYKVDVASFESLALPELQVREGTDLFIIDEVGKMELFSSSFFPAVLRVLESNIPVLASIPIPKFGRDIPEVARLRNHAGATCFMLSVSNRDAVGEQIRSLLEDLLIKH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2159 191 SMART AAA_5 4 157 IPR003593 -
Ssu2g2159 191 Hamap Nucleoside-triphosphatase <locus_tag>. 6 188 IPR004948 GO:0017111
Ssu2g2159 191 Pfam NTPase 8 180 IPR004948 GO:0017111
Ssu2g2159 191 PANTHER CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE 4 190 IPR004948 GO:0017111
Ssu2g2159 191 Gene3D - 6 187 IPR027417 -
Ssu2g2159 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 184 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2159 K06928 - gmx:100527302 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2159 2 77542404 77544439 Ssu2g2159 2 77542404 77544439 ECH