Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2155 ATGGCGAGCATAAAGCCTTTGCCGGAGGCTGTTCGTAGCTCACTGCGTTCCGGCATTTTCCTGTTCGACTTCACGCGTGTCGTCGAGGAACTGGTTTTCAATAGCCTCGATGCTCGTGCCACAAAGGTATCAGTGTTTGTGAGTATTGGGAGCTGCTATTTGAAAGTAGTTGATGatgGAAGTGGAATCACTCGAGATGGGCTGGAATTGGTGGGAGAAAGACATGCAGCAACatcaaaatttcttaatttggttGATCTGAATGCCACGAGTGAGAACTTTGGTTTTCGTGGGGAAGCTTTAGCTTCCATTTCTGAAGTCTCTTTGCTGGAGATTGTGACACGAACATATGGAAGACCAAATGGATATCGAAAAGTATTGAAGGGGTGCAAGTGTTTATATCTTGGTATTGATGATGACAGAAAGGAAGTGGGCACCACAGTTGTTGTCCGTGATTTATTTTACAACCAACCAGTGCGGAGAAAATACATGCAATCCagCCCCAATAAGGTACTGCAATCAATCAAGAAATCTGTAATGCGGCTTGCACTTGTGCGTCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATGAGCTCTTTTGCACACATTCTGCTTCTTCTCCTCTGTCACTTGTAACCAGTGGCTTTGGGGTAGAGGTCACAAGCTCTCTTCACAATTTAGAAGTTGAAAATGATATCATAAAGCTTTCTGGATATATATCTGGTCCTTGCAATACTTTGAATATGAAGGCCTTGCAGTATGTCTATGTCAACTCACAATTAGTTTGCAAGGGCCCAATTCATAAGCTTCTGAATCAACTGGCTATTAGGTTTGAGCATCTGAACTCATGGAATACTGATAATGAGTTTCGAAACAAGAAGAGAACCAGGTCTCAACCATGTCCGGCTTATCTCTTGAATTTAAGTTGCCCCCGATCTTTGTATGATTTGGCCTTTGAGCCATCAAAAACTTATGTTAAATTCAAGGATTGGACTCCTATACTAAATTTCATTGAGAACGCCATCAAACAATTCTGGGGGGACATAGCTTCTGTAGAGCCCTCCAATCAAGCCGCTTACATGGTAGAAGATCAACAAGAGAAAGCAGTCAACATCATTTCAGCAGTGTCAGATATATCAAAGTTTAGAAACCAAAACCGTAAGGATTGCCTAGACCTCTTTTTTTCTAGTTCAGACAAGCTAATTGAAGATGACTATCATCAATCCAACAGGGAAGATGTTAGAACCTCTGTTGATTACTTACATCAAGGGGCCACAATGTTCAAAGAGCAACAAAGTAAGGGAGACTTTCTTTTTCAGACTGGTTATTCTGGCAACTTATTGGATGGTTCATATGCCAAGTGCATGTCCACTGTGATGAGAAAGCATAACAGTTTGTTGATGTATGATAACAATAGTTTATTGGAAGGAGAGAACTTTTTTAATGGTGAAATTCCCACTGTAGAAAGTTTCTATGATAATGTACCTTCTGATGCACCAAGTTCTTCCCATGGAAGAAAATTCCATAAAATAGAAGCTGATGTGATCAATGAATCATTTGAAGATGATTTACTTTATAACTGCAATGGGTACGGTTATGATGTAAAGATTAATGGGAATTTGCAAAAGCCTTTTCTAAAGAGATGCTCTACACTAGGAAGTATCCTGCATGAGAAGGCTTTGTTTGTAAATGATGAATATGAACTCCAAACTGATAGCTTTTGGAGCAAGCAGAATATGGGGGAGGATTATAGAAGTGGTAAGGATTTATATGCCCAGCCATATCAAGaagtgacaaaaaaatttaagatgtcTAAAGATTCTGACTTTCTCATAAGAGCGTTGGCTAAAGAAAATTGTCTCCCTCCAGATTCATGCTATTCACCAACAAAAATAGGAAGCTCTGGGTCAGATGAtcagttattaaattttgaatggcATCCTGTCTACCAAAAACCCTCATCTCCAGCATCTGCATTAGGTGTTTATCATACAAATGATATTAAAGATGATCTTGGAGGAGTATCTAGATGCTATAAAAGGATCCATCGTACAAAACATTTTGATGACAGAGAGAACGAATGCACTTTCAGGTACAATATGTCAAGGAATGCCAACCAACATCACTGTGCATCAAGTATTGCAAATGTTGGATATAATTTTGATGTTGCTGGTGATTGTGGTGAAATATTCAACAGACTAGTCGACTGGCCTGATTTTGGTGATATATATTCTACAAAACGGTCAGATATTTTAAACGAGGAGCCAGACTGGCTGTTGCCTGAGTCATGTGTTAAAAGCTGCAAGAGACCTAACAAGAACAAAGGCAAAAGGGATCAATCTAGAATCCCAACTTTGGAGGAGAATCTTGAAAGATCTAGAAGAAGCTTTTCAGCTCCTCCTTTTCATAGAAGCAAAAGGaggtttttctctttaaatcaTCCTTCAGAAATGATAGCCAAAAGACAGATTGGCCGAGTGTCCAACCCTGCTTTCAATCATCGAGAAGCTAGTGATTTTAAACATCCTCAACATTCTCCCGTTGCTCTTCACCAAAGCACCAAAGATCTCTTGTTGCAAGAATTCAAAACTAATGTGAGACAGACTTCAGAGGTTCTGGGAGACATGCAGGTTAATGACAATACAGAGATTGATGGATTTGAAAGTTTTAACGTTCAAAACAGTGCTCCATTTGGGGAATTGATCACTAAGGATGTGCAAGATTCCATAGATTACGGGACAAAATGGAGGAACTGCTCACCCAAAATTACAAAGAATGATAAATTGGCTAATATTCAAAGTCAAAACAATATACTTGATATTTCTTCTGGATTCTTGCATCTTGCTGGAGATTCATTGATTCCTGAAACTATCAGTAAGAAATGCCTTGAGGATGGTAAAGTTCTGCATCAGGTGGATAAAAAATTCATTCCAGTCGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAAAGAATCAGACTGGAAGAATTGCGTCAAAAGGTATTGTCAGGAGAAGCAAAAACAGTAACCTATCTAGATGCTGAACAGGAACTGGTACTGCCAGAGATTGGTTATCAACTGCTTCATAGTTATAGTGAACAGATTAAAGATTGGGGCTGGATCTGTAACATTCATACTCAAAATTCTGAATCCTTTAGAAGGAATTTGGATATTCTCAACAGACCACAAATGGCTGTCACACTTACTGCGGTACCGTGTATTTTAGGGgtcaaattaaatgatgttgATCTTTTAGAATTTCTTCAGCAGCTTTCTGACACCGATGGATCATCAACAATGCCACCCTCTGTCATACGAGTGCTAAATTTGAAAGCATGCAGGGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGCTCCCTTCTAGTTGAGGAGCTAAAGCATACATCGCTTTGTTTCCAATGTGCTCATGGGCGACCAACTACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAGATAACCAAGCTTCGACTGATGAACGAGTGTTCAAGTGACGAGTGGCATGGATTACGTAGACATAAAGTACGTGTTGAACGTGCAGCACAGCGTTTAAATTCTGCTAGAGGAATTTGA 3630 0.389 MASIKPLPEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSIGSCYLKVVDDGSGITRDGLELVGERHAATSKFLNLVDLNATSENFGFRGEALASISEVSLLEIVTRTYGRPNGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKKSVMRLALVRPNISFKVVDIEREDELFCTHSASSPLSLVTSGFGVEVTSSLHNLEVENDIIKLSGYISGPCNTLNMKALQYVYVNSQLVCKGPIHKLLNQLAIRFEHLNSWNTDNEFRNKKRTRSQPCPAYLLNLSCPRSLYDLAFEPSKTYVKFKDWTPILNFIENAIKQFWGDIASVEPSNQAAYMVEDQQEKAVNIISAVSDISKFRNQNRKDCLDLFFSSSDKLIEDDYHQSNREDVRTSVDYLHQGATMFKEQQSKGDFLFQTGYSGNLLDGSYAKCMSTVMRKHNSLLMYDNNSLLEGENFFNGEIPTVESFYDNVPSDAPSSSHGRKFHKIEADVINESFEDDLLYNCNGYGYDVKINGNLQKPFLKRCSTLGSILHEKALFVNDEYELQTDSFWSKQNMGEDYRSGKDLYAQPYQEVTKKFKMSKDSDFLIRALAKENCLPPDSCYSPTKIGSSGSDDQLLNFEWHPVYQKPSSPASALGVYHTNDIKDDLGGVSRCYKRIHRTKHFDDRENECTFRYNMSRNANQHHCASSIANVGYNFDVAGDCGEIFNRLVDWPDFGDIYSTKRSDILNEEPDWLLPESCVKSCKRPNKNKGKRDQSRIPTLEENLERSRRSFSAPPFHRSKRRFFSLNHPSEMIAKRQIGRVSNPAFNHREASDFKHPQHSPVALHQSTKDLLLQEFKTNVRQTSEVLGDMQVNDNTEIDGFESFNVQNSAPFGELITKDVQDSIDYGTKWRNCSPKITKNDKLANIQSQNNILDISSGFLHLAGDSLIPETISKKCLEDGKVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEAKTVTYLDAEQELVLPEIGYQLLHSYSEQIKDWGWICNIHTQNSESFRRNLDILNRPQMAVTLTAVPCILGVKLNDVDLLEFLQQLSDTDGSSTMPPSVIRVLNLKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQITKLRLMNECSSDEWHGLRRHKVRVERAAQRLNSARGI 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2155 1209 MobiDBLite consensus disorder prediction 780 801 - -
Ssu2g2155 1209 CDD HATPase_MutL-MLH-PMS-like 11 199 - -
Ssu2g2155 1209 SUPERFAMILY Ribosomal protein S5 domain 2-like 200 350 IPR020568 -
Ssu2g2155 1209 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 119 - -
Ssu2g2155 1209 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1167 IPR028830 GO:0006298
Ssu2g2155 1209 Gene3D - 216 354 IPR014721 -
Ssu2g2155 1209 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 IPR014762 -
Ssu2g2155 1209 MobiDBLite consensus disorder prediction 772 801 - -
Ssu2g2155 1209 SMART DNA_mis_repair_2 215 350 IPR013507 GO:0005524|GO:0006298|GO:0030983
Ssu2g2155 1209 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 203 IPR036890 -
Ssu2g2155 1209 SUPERFAMILY DNA mismatch repair protein MutL 968 1162 IPR037198 -
Ssu2g2155 1209 SMART MutL_C_2 971 1131 IPR014790 GO:0005524|GO:0006298
Ssu2g2155 1209 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1167 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Ssu2g2155 1209 Gene3D - 2 209 IPR036890 -
Ssu2g2155 1209 Gene3D - 974 1162 IPR042120 -
Ssu2g2155 1209 Gene3D - 1015 1126 IPR042121 -
Ssu2g2155 1209 Pfam MutL C terminal dimerisation domain 969 1131 IPR014790 GO:0005524|GO:0006298
Ssu2g2155 1209 Pfam DNA mismatch repair protein, C-terminal domain 219 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2155 Ssu-Chr2 77492597 77507958 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2155 K08739 - gmx:100788019 2122.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2155 2 77492597 77507958 Ssu2g2155 2 77492597 77507958 ECH