Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2140 ATGGTCATGTCCATTATTCTTcagaaagataagaaaattatatgcgCCACGAAGTGCATAAACCCGCCTGCTGAAAtGCCACAAAAATTGAGCATAACTcgtgaaatttcaaaaaagaagGTATCTAGTCTTTCTAGATTACCCCGATTTTCACTAACTCCGGCTCCAAATAATGCACGTGAAAAGTATGAGTGGGGGAACTTTTTGAATTTCCTATGCAAACATGACAAGGTTGCTATTATAAACTTTGAGCAGTACACATTTTACATTCTACCTCCTAGTATAGCTTCAACATCTAGCCCAGTCAATGTTGCATATCAGATAGATAATACATGTTCTGTGGATACTCATCCAAGGGATTGTGAATCAGGTTCACACTTAGAGGAATGTGGTGGACCGAATACTGCTGAAGATCTTAAGTTTCATCGAGCTGAAGATCATGCTCATCATTTTACAGCTGAAACTTGTACTGAAGTTCAATTTCGACTACCTGTGAAAAATTTCATACGGGCAGACCCAAGTTACCTGAAAACTCTTGGTCAGGCTCATTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCTAGGGATGCCAAAGCAACTAAGATGGACATTTTTGTAGATATGATCAACTTGAAATCTGGGAAGGATGTCCCTATGCTGTCAATTATTGATGATGGTCAAGGGATGAACCATGATGAGGTTATGAAAATGGTATCTTTTGGGCACAAACAATCTGATAAAGATGACAAGGATCACATTGGCAAATTTGGTGTTGGATTCAAAACAGGAGCAATGAGGCTTGGGAGAGATGTTCTGGTTATAACACAGACAACTAATTCCAGATCTCTAGCTTTTCTTTCACAATCACTGAATGAAGACAAAGATAATATTGAAATTCCCATAGTTAGTTATTGTCGACAAGGACAACGTATGGAAGTTGACATAAGTATGCAGTCTGAAACATTGGCAAAATACAATTTGAAAGCTATTAAGGAGTTTTCACCATTTAATAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTGGGGGTGGTACAGGAACACAAATATACATTTGGAACTTGGATGAATGGGGATCAAAGTATTGTTTAGAATGGCATGAAGGATTGAAAGGTGGGAGTTCTTTTCACCAAGGTGACATTTTAATCCGTAGCAGAAGGACTCGTTCTCGTCCAGGCCAGATTAGTCAAAAGGTTCCACTGGATTACTCATTACGAGCTTATTTAGAAGTTATATTCTTAGTTCCTCGAATGAAGATAAGTGTACAAGGGACACAGGTTAAGAGTCGCCCACTAGCAAATTTCTTTACGCAAACTGTTATTGAAACTGGTAACATCTTGGGAAGGCCAGTTGAATTAATTTTGGGATTTAGTCAGTTAGAATGGGAGCGTGCAAATtgtggaatttttttatattggcaCGGTCGCTTAATTGAGGCTTACAAGAGAGTTGGTGGCATGATTCATAATGCAGATGTGGGCCGGGGTGTAATTGGTGTCATAGATGTGACCAATTTAATGGATGTTCAGGATGGTCGTGTGTGGGTGCATAATAACAAACAGGGATTCCAAGACTCTGAACCATATGCATGTCTTGAGGAGTGGCTCGGTAGACAAGCAGATGAATACTGGGACAATAATTTTGATTCACTTAAGTTGGACAAAGATAATTGTGTCTTCAAACCTGATCATGAGTGGGTACAATGTGACAAGTGTAGAAAGTGGAGAATATTACCTTCTGATTTTGATAGCAGAAAATTGCCTATGCAATGGTTTTGTTATATGGAGCCTTTCAAAGGTCAATGTGCAGATGCTGAACAGAAGATGGAGCCTGGCATAGTTAATGTTTCCACGAAGCGGTCGGGTTATGATTGCACGCTGAAGAATTTTGATAGTAAAAGGATGGAAGTTGTTATGAAAATGTTTGGCACAGATGATGACAAATTAGTGAATTCTGAGGATGTCAGATTTCCGGCCTTAAAGCGGTTGAGAAAGGGGGTACGAAGATAG 2040 0.3819 MVMSIILQKDKKIICATKCINPPAEMPQKLSITREISKKKVSSLSRLPRFSLTPAPNNAREKYEWGNFLNFLCKHDKVAIINFEQYTFYILPPSIASTSSPVNVAYQIDNTCSVDTHPRDCESGSHLEECGGPNTAEDLKFHRAEDHAHHFTAETCTEVQFRLPVKNFIRADPSYLKTLGQAHSGWIFGGIAELVDNSRDAKATKMDIFVDMINLKSGKDVPMLSIIDDGQGMNHDEVMKMVSFGHKQSDKDDKDHIGKFGVGFKTGAMRLGRDVLVITQTTNSRSLAFLSQSLNEDKDNIEIPIVSYCRQGQRMEVDISMQSETLAKYNLKAIKEFSPFNKYLIGEKAALFGGGTGTQIYIWNLDEWGSKYCLEWHEGLKGGSSFHQGDILIRSRRTRSRPGQISQKVPLDYSLRAYLEVIFLVPRMKISVQGTQVKSRPLANFFTQTVIETGNILGRPVELILGFSQLEWERANCGIFLYWHGRLIEAYKRVGGMIHNADVGRGVIGVIDVTNLMDVQDGRVWVHNNKQGFQDSEPYACLEEWLGRQADEYWDNNFDSLKLDKDNCVFKPDHEWVQCDKCRKWRILPSDFDSRKLPMQWFCYMEPFKGQCADAEQKMEPGIVNVSTKRSGYDCTLKNFDSKRMEVVMKMFGTDDDKLVNSEDVRFPALKRLRKGVRR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2140 679 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 3 678 IPR045261 GO:0016887
Ssu2g2140 679 Pfam CW-type Zinc Finger 575 617 IPR011124 GO:0008270
Ssu2g2140 679 CDD HATPase_MORC-like 175 295 - -
Ssu2g2140 679 PANTHER OS06G0622000 PROTEIN 3 678 - -
Ssu2g2140 679 Pfam Morc6 ribosomal protein S5 domain 2-like 413 554 IPR041006 -
Ssu2g2140 679 Gene3D - 562 621 - -
Ssu2g2140 679 ProSiteProfiles Zinc finger CW-type profile. 570 620 IPR011124 GO:0008270
Ssu2g2140 679 Gene3D - 162 345 IPR036890 -
Ssu2g2140 679 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 180 344 IPR036890 -
Ssu2g2140 679 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 191 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2140 - - gmx:100782161 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2140 2 77247647 77271047 Ssu2g2140 2 77247647 77271047 ECH