Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2128 ATGAATTTTGTTGTCCCTTCATCCTTGCCATTATCCATATTCACAGGAACAAAAGACAATAGAGATAGAACTATGGAGGAGACTATGCCAGTGATAGATCTGGAGAAGATCTCTGAGCAAGGGGAGTGCAAGAAGCTAAGAGAGGCATGTGAAAGATGGGATTGTTTCAGGATCATTAACCACTCTATTCCTGCAACCCTCATGGCTGTGATGAAGAAGGTCATTGGAGCTCTGCTTGACCTTCCTATGGAGATCAAGAAGCGCAACACAGAAGTCATTGCTCGCAGTGGTTACATTGCACCAAGCGCAGTCAACCCTTTGTATGAGGCCCTGGGCCTCTATGACTTGGGTTCCTCACAAGCTATGCACAATTTCTGCTCTCAACTTAATGCCTCACCCCACCAAGGGCAAATAATGGAGGCATATGGCCAAGCGATTCATGGGTTGGCAATAAAGATAGGACAAAAGATGGCTGAATCACTAGGGGTAGTGGTTGCTGATTTTGAGGACTGGCCATGCCAGTTTAGAATTAACAAATATAACTTCACCCCAGAAGCGGTAGGGTCCACTGGAGTTCAAATTCACACAGATACAGGGTTCCTAACTATTCTTCaagatgatgaaaatgttggGGGTCTTGAAGTAATAGACAGCTCTGGCTCATTCGTGGCAATCCCTCCATTCCCAGGGACCCTCCTTGTGAATCTTGGAGACATTGCCCATGTATGGAGCAATGGAAGGTTTCGCAATTTGAAACACCGTGTACAATGCAAGGAAGCGACCAAACGTCTGTCGATTGCTACATTTATGTTAGCACCCAGGAATAGGAATGTTGAGGCCCCAGCGGAATTGGTGGACCATGATCACCCACGTCTAtatcaaacttttatttatgaAGATTATCGGAAGCTCAGAGTTTACAAGAAGATGCCCACCGGTGAAGCCCTGGAGTTATTACGCTTGGCCTAG 969 0.4479 MNFVVPSSLPLSIFTGTKDNRDRTMEETMPVIDLEKISEQGECKKLREACERWDCFRIINHSIPATLMAVMKKVIGALLDLPMEIKKRNTEVIARSGYIAPSAVNPLYEALGLYDLGSSQAMHNFCSQLNASPHQGQIMEAYGQAIHGLAIKIGQKMAESLGVVVADFEDWPCQFRINKYNFTPEAVGSTGVQIHTDTGFLTILQDDENVGGLEVIDSSGSFVAIPPFPGTLLVNLGDIAHVWSNGRFRNLKHRVQCKEATKRLSIATFMLAPRNRNVEAPAELVDHDHPRLYQTFIYEDYRKLRVYKKMPTGEALELLRLA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2128 322 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 171 273 IPR005123 -
Ssu2g2128 322 Pfam non-haem dioxygenase in morphine synthesis N-terminal 30 99 IPR026992 -
Ssu2g2128 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 27 320 - -
Ssu2g2128 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 27 320 - -
Ssu2g2128 322 SUPERFAMILY Clavaminate synthase-like 27 309 - -
Ssu2g2128 322 Gene3D - 5 304 IPR027443 -
Ssu2g2128 322 Pfam 2OG-Fe(II) oxygenase superfamily 174 269 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2128 Ssu-Chr2 76943193 76945031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2128 19 301 Glycosyltransferase AT5G59530 24.252 5.06e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2128 K23947 - gmx:100783059 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2128 2 76943193 76945031 Ssu2g2128 2 76943193 76945031 ECH