Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2123 ATGGTCCCCAAACCCATCATAGTGACCTCACAACCAGCCTCTTCTGCCTCTCCACCCCTCCCTCTCCTCAACGCGACATCCGTGAGAACAGAAGAAAGGCCCCAAACCCAAACCATAAGAACAACCACCACCGGCCCAACACCAGTAACTCCTCCCCCACCCTCTCCCACCACCCAAAAAACCAAGCCAAACCCAGCCATCAAAACGACACCACCGCGCGCGGAACTAAAACGAAGACCAGAACCATGGGTGCCCGCACTAATGCTCAACGCATTCGACGACATCATCAACAACTTCATAGACCCTCCGCTCAAACCTTCCGTGGACCCCCGACACGTGCTATCCCAAAACTTCTCTCCCGTGGACGAGCTCCCCCCGACGGGGTGCGAAGTCGTGGAAGGCTCCCTCCCGCCGTGCCTCGACGGCGGCGCGTACATCAGAAACGGCCCCAACCCGCAGTTCCTCCCGCGAGGACCCTACCACCTCTTCGACGGCGACGGCATGCTCCACGCCCTCCGCATCTCCCAAGGCAAACCCACACTCTGCAGCCGCTACGTCAAAACCTACAAATACACAACCGAAAACGACGCCGGTTTCCCTCTCATCCCCAACGTCTTCTCCGGCTTCAACTCCCTCGTAGCCTCCGCGGCGCGCGGCTCTCTCACCGCGGCGAGAGTCTTAACGGGACAGTTCAACCCCACCAACGGCATTGGGTTAGCGAACACCAGCTTAGCCTTCTTCGGAAACCGTCTCTTCGCGCTCGGCGAATCCGACCTCCCTTACGCCGTTAACTTAACCCCTAACGGCGACATCGAAACGATCGGTCGCCACGACTTTGACGGCAAACTGGTGTTCAGCATGACGGCGCACCCTAAGATAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGCCCCGTGCCACCTTTCCTCACATATTTCCGTTTCGATCCTAACGGGAGAAAACACGAAGACGTGCCTATATTCTCCATGCCAACACCTTCCCTCATCCACGACTTCGCCATCACCAAGAAGTACGCAATCTTCTCTGACATTCAAATTGGAATGAACCCTCTCGACATGATCGCCGGTGGCTCCCCCGTGGGATCGGTGGCTTCCAAGGTGCCAAGGCTGGGAATCCTTCCTCGaGATGCTACTGATGAGTCAATGATAAAGTGGTTGGATGTGCCGGGGTTTAATATTATCCACGCGATCAACGCCTGGGACGAGGATGAGGGCAGAACGGTGGTTCTTGTGGCGCCGAATATTCTTTCCGTGGAGCACACGCTGGAGAGAATGGAGCTTATTCACGCGATGGTGGAGAAGGTGAGGATTGAGCTGGACACGGGGATTGTGACTCGGCAACCCGTGTCGGCGCGTAACCTTGATTTCGGGGTTATAAACCCGGCGTTTGTTGGGAAAAAGAACAGGTTCGTTTACGCGGCGATTGGGGACCCAATGCCGAAGATATCGGGGGTGGTGAAGCTCGACGTGTCTAAGGGGGAGGAGCGGAAGGACTGTACGGTGGGGTGCAGGATGTACGGCGAGGGGTGTTACGGTGGTGAGCCATTTTTCGTGGCGAGGGAAGAAGAGGGAGAGGAGGATGACGGGTACTTGGTGACCTACGTGCACGACGAGAGGAAGGGAGAGTCGAGGTTTCTGGTGATGGATGCGAAGTCGCCGGAGCTGGATGTGGTGGCGGCCGTGAGGCTTCCCCGCCGGGTTCCGTACGGTTTTCATGGGCTGTTTGTGAAGGAGAGTGAGCTCAGGAAGGTGCCGTTGCCGTGA 1791 0.5745 MVPKPIIVTSQPASSASPPLPLLNATSVRTEERPQTQTIRTTTTGPTPVTPPPPSPTTQKTKPNPAIKTTPPRAELKRRPEPWVPALMLNAFDDIINNFIDPPLKPSVDPRHVLSQNFSPVDELPPTGCEVVEGSLPPCLDGGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISQGKPTLCSRYVKTYKYTTENDAGFPLIPNVFSGFNSLVASAARGSLTAARVLTGQFNPTNGIGLANTSLAFFGNRLFALGESDLPYAVNLTPNGDIETIGRHDFDGKLVFSMTAHPKIDPDTGECFAFRYGPVPPFLTYFRFDPNGRKHEDVPIFSMPTPSLIHDFAITKKYAIFSDIQIGMNPLDMIAGGSPVGSVASKVPRLGILPRDATDESMIKWLDVPGFNIIHAINAWDEDEGRTVVLVAPNILSVEHTLERMELIHAMVEKVRIELDTGIVTRQPVSARNLDFGVINPAFVGKKNRFVYAAIGDPMPKISGVVKLDVSKGEERKDCTVGCRMYGEGCYGGEPFFVAREEEGEEDDGYLVTYVHDERKGESRFLVMDAKSPELDVVAAVRLPRRVPYGFHGLFVKESELRKVPLP 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2123 596 MobiDBLite consensus disorder prediction 8 45 - -
Ssu2g2123 596 Pfam Retinal pigment epithelial membrane protein 121 586 IPR004294 GO:0016702
Ssu2g2123 596 PANTHER BETA-CAROTENE DIOXYGENASE 21 592 IPR004294 GO:0016702
Ssu2g2123 596 MobiDBLite consensus disorder prediction 1 79 - -
Ssu2g2123 596 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 21 592 - -
Ssu2g2123 596 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2123 Ssu-Chr2 76833501 76835955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2123 K09840 - gmx:100777875 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2123 2 76833501 76835955 Ssu2g2123 2 76833501 76835955 ECH