Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2116 ATGGAGGGTGAGGAAGGAGGAGGCATAAGGCTGAGCAAGCGAATCGCGAACGGAGAAGTGGACTACAAGAACAAATCCGGCACCGCCTGGAGCCACTCCTATCTCAACCAGAAGCCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCGCCGAACAGACCCACGCCAACCGCCAGCGCCGTGCTGAAGAGTTCGCACAGGAGCAAGAGTTCTTCCGCCAAACCGCTCTCATATCCAACAAGGAGAAGGAAAAGGCGGAGATGATGCAAGCCGTTAGTTTCATGTACGTTCGTCCTCCTGGATACAACGCGGAAAGTGCCAAAGCTGCGGAGATGAATgatgagaagaaaagagaggacACGAGCAAGGGGCCTAATGCTGATGATGGACCTTCCTCTTCCATGCCGCAGAGTTCCTCGCTTTTgaatgaagagaagaaaaaaccgAGGCCAAAGGATGTATTTGGGCGTCCTCTTCCGACTGAAGAAGAATTCGCAGTTCTTAAAAATGCGCCTAGGCTGGAAACAGGAGTTCCTGCTAGGGTGAAACCTTTTGGAGTTGAAGTCCGTAATGTAAAATGTTTAAGATGTGGGAACTATGGTCACCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATGCTATAATGCCTATTGAGGAAAGCAGATTGAAAAGAGATGATCCCTTGAATGTTATCCTTGCACATACAGATCCTACTGAGCCCCTAAAATGGGAGCTCAAGCAGAGGCCAGGAATCAGTCCTCCTCGCGGAGGGTTCAAACCAGATGATCCCAACCAGCAGATAGTTGCTGAGGAAATATTTGATGAGTATGGAGGTTTTCTTGGTATGGATAATATCCCTGAGTTATTAACCAACTTTTCTAAGAAACCAAAGAAGTCCAAAAAGAGCAAGCACAAAAAGCTGCAACAAATAAATTCAGATAGTGGAGCATCATCGGATGATAGAGAGaggtgtaagaaaaaaaaggttaaggTAAACAAAAAGAAGCGAGATCGGTCCAGGTCAAGTTCATCAGAAACTTCAGTCTCTGAAGATCATGGAAAGAGCAGACACAAGAGTTTCCATTCATTGGAAGATTCTGACAGTTACAGGAATGATCGAAGTAGAAGTAAACAAGAGCATTCCTTTTCGCCCAAAGGTTCTGACCATCCTAGGCATGGTAGGAGTAAACATGGCAGAAGAAAGCATTCTTTTTCATCTGAGGAGTTTGGTCTTGATGGATACCGCAGAAGTTACAAGAACACTGATAAGCATTCTTTTTCATCTGAAGATTCTGACAGTCAGAGGGATGATCAAGGTAGAAAGAATGTACAAAAGCATAAGAGGAAAGATAGCAGAAAAAGACATTCATATTCATATGAGGATTCTGGTCCTGCCTGTGATCATGCTGATATCAAGAGCAGGGATTCGCTTTCCTATTCATCTGATGATTCTGATCATCAAAGACTACCCAAGGTTAAAAGGAGCAGCCATAAGCACTCGTCAACAGTCCATTGCGATTCTCAAAAGCATAACAGAAATTCTGGTCTTGATCGCTACCAAGGAAATCAGAAGAGCAGAGCTGTGCATTCTTATTCATCTGACGATTCTGATGTCGACAAAGATGATCAAGATAGAAGAATCAAACAAAAGTATTGCCATACGCCCAAGGGTTCTGAGCATCCTGAGAGGGATATGAATAAACAGAACAGGAAAAAGCATTGTTATTCATCGAAGGATTCTAGTGCTGATGGATATCATAGAAGTGAAAGAGGTAGATATGAGCGTTCTTATTCACCTGATTATACTGATCATCGTGAGCAACATCATAGGTCAAGAAGGAGCAGCTACAAGCATTGA 1869 0.4286 MEGEEGGGIRLSKRIANGEVDYKNKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHANRQRRAEEFAQEQEFFRQTALISNKEKEKAEMMQAVSFMYVRPPGYNAESAKAAEMNDEKKREDTSKGPNADDGPSSSMPQSSSLLNEEKKKPRPKDVFGRPLPTEEEFAVLKNAPRLETGVPARVKPFGVEVRNVKCLRCGNYGHQSGDRECPLKDAIMPIEESRLKRDDPLNVILAHTDPTEPLKWELKQRPGISPPRGGFKPDDPNQQIVAEEIFDEYGGFLGMDNIPELLTNFSKKPKKSKKSKHKKLQQINSDSGASSDDRERCKKKKVKVNKKKRDRSRSSSSETSVSEDHGKSRHKSFHSLEDSDSYRNDRSRSKQEHSFSPKGSDHPRHGRSKHGRRKHSFSSEEFGLDGYRRSYKNTDKHSFSSEDSDSQRDDQGRKNVQKHKRKDSRKRHSYSYEDSGPACDHADIKSRDSLSYSSDDSDHQRLPKVKRSSHKHSSTVHCDSQKHNRNSGLDRYQGNQKSRAVHSYSSDDSDVDKDDQDRRIKQKYCHTPKGSEHPERDMNKQNRKKHCYSSKDSSADGYHRSERGRYERSYSPDYTDHREQHHRSRRSSYKH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2116 622 MobiDBLite consensus disorder prediction 342 393 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 503 517 - -
Ssu2g2116 622 PANTHER CBF1 INTERACTING COREPRESSOR CIR 10 536 IPR040014 GO:0003714
Ssu2g2116 622 MobiDBLite consensus disorder prediction 112 128 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 146 161 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 458 494 - -
Ssu2g2116 622 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 40 72 IPR019339 -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 405 448 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 249 269 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 109 161 - -
Ssu2g2116 622 SMART Cir_N_3 39 73 IPR019339 -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 518 533 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 297 622 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 534 613 - -
Ssu2g2116 622 MobiDBLite consensus disorder prediction 129 145 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2116 K06066 - gmx:100788280 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2116 2 76718685 76723874 Ssu2g2116 2 76718685 76723874 ECH