Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2115 ATGGCACCAGCTAGGGTTTTCGGTGCGAGCGCCGGCAGAGCGTTCATGGCGGCGGCGGCGAACAGCGCGGCCAAGAAAGTTGCTCCGTCCGGTGGAGCCGCCGCCAAAACCACGGCGAAGAAGACGGTGGCGAAAAGAAGCGCCAACACCGGCATACAGAAGGTGGTTCCGGTCTCTTCCGAGCTCGGCCACTTCCTCGGCGCTCCTCAAGTGTCGCGAACCGACGCCGTCAAAAGAGTCTGGGAGTACATCAAGCTGCAGAATCTTCAGAATCCTACTAATAAGAAGGAGATATTTTGTGATGAAAAGCTGAAGACCATTTTTGATGGGAAAGATAAGGTTGGGTTCACAGAGATTGCTAGATTGCTGTCTAACCATTTTGTGAAATCAGGCTGA 396 0.5379 MAPARVFGASAGRAFMAAAANSAAKKVAPSGGAAAKTTAKKTVAKRSANTGIQKVVPVSSELGHFLGAPQVSRTDAVKRVWEYIKLQNLQNPTNKKEIFCDEKLKTIFDGKDKVGFTEIARLLSNHFVKSG 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2115 131 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 4 130 - -
Ssu2g2115 131 CDD SWIB-MDM2_like 56 127 - -
Ssu2g2115 131 SUPERFAMILY SWIB/MDM2 domain 46 129 IPR036885 -
Ssu2g2115 131 Gene3D SWIB/MDM2 domain 46 131 IPR036885 -
Ssu2g2115 131 ProSiteProfiles SWIB/MDM2 domain profile. 51 129 IPR003121 -
Ssu2g2115 131 Pfam SWIB/MDM2 domain 56 127 IPR003121 -
Ssu2g2115 131 PANTHER PROTEIN TRI1 4 130 - -
Ssu2g2115 131 SMART swib_2 52 131 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2115 Ssu-Chr2 76714354 76716261 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Ssu2g2115 SWIB 2.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2115 - - gmx:100779127 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2115 2 76714354 76716261 Ssu2g2115 2 76714354 76716261 ECH