Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2113 ATGACTTTTTCGGACGACGAGGACGAGAATCTAGCCCAATTTCTGGAATCTGAAGTCCTCTCGGAGGTCTCTGACAAGGAAGAGGAAAATGTGGAGGAACCCCAAGCAAAGAGAAAGCGCGTAGAGGAGGCAGAGAGTACTAAACAAAATCAAAGTTCTGATTCATCACCTGTGCCGAAGAACATTGTTGTCGATAATGGGGTGGTGCCGAGAAGGATTGAGACTGGTTGTTTCAGCAAAATTCCACCTGAGCTTTTTCATCATATCCTTAAATTTCTGTCATCCGAGGACCTTGTTTCTTGTTCCTTAGTCTGTAGGTTTCTGAATTATGCTGCATCTGATGAGGCGTTGTGGCGTCGCTTGTACTGTATGCGATGGGGCCTTCTTCCCCCTACAAGGAAGATAAGGGAATGTCCGTGGAAAAAGTTATACATTCAGCGTGATGGAGAGGACATGGTAGAACTTGTTAGGAATTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCACCTCATCCTTCACAGTTGAAGGATGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTCTCATCATGGAAAAGCAGCAGGGGCCTAAGTGATACAGTGGTAGCTGATCATGCTTGTTCTGGGGAAACATGCTCTTACTACCAAATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGtTTGTGACGATACATGTAGAGAAGTAATTATGGATCCCACAAACGAGCTTTTGGTCTGTACAATATCGGGGCACTGTTTTGATAGATTATTGTCACCCTCGGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGTGACTGATGAGGCCGAACCATTTATGGGATCTGGCCGCTTTGCACGAGCTTATTCACTGGGATATAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTGA 975 0.441 MTFSDDEDENLAQFLESEVLSEVSDKEEENVEEPQAKRKRVEEAESTKQNQSSDSSPVPKNIVVDNGVVPRRIETGCFSKIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGLLPPTRKIRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVADHACSGETCSYYQIGDVFICEKTGQVHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDAEQQQGGVTDEAEPFMGSGRFARAYSLGYNCADEKELEATLRFC 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2113 324 SMART fbox_2 81 121 IPR001810 GO:0005515
Ssu2g2113 324 MobiDBLite consensus disorder prediction 30 47 - -
Ssu2g2113 324 MobiDBLite consensus disorder prediction 21 62 - -
Ssu2g2113 324 Gene3D - 66 152 - -
Ssu2g2113 324 PANTHER F-BOX ONLY PROTEIN 3 68 267 - -
Ssu2g2113 324 PANTHER F-BOX ONLY PROTEIN 3 268 324 - -
Ssu2g2113 324 Pfam UL92 family 222 288 IPR004289 -
Ssu2g2113 324 Pfam F-box-like 79 123 IPR001810 GO:0005515
Ssu2g2113 324 ProSiteProfiles F-box domain profile. 75 121 IPR001810 GO:0005515
Ssu2g2113 324 SUPERFAMILY F-box domain 69 147 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2113 - - gmx:100778591 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2113 2 76693196 76696071 Ssu2g2113 2 76693196 76696071 ECH