Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2108 ATGGGCAGCCATATGAGTACAGCAGATGTTGGCTGGGGTTCTCCAACATTTCATAAAATGGGGAGAGAAAAAGTTATTCTGATCAACTTGATACTGCCTTTTGGTTTTGAGCTGTTGATGTGTGACACTGACATGGTTTGGTTGAAGAACCCACTTCCATATCTTGCTCGTTATCCTGGAGCAGACGTTTTAACATCCAGTGATCAAGTTGTACCAACAGTGGTTGATGATAGTCTAGAAATTTGGCAAGAAGTTGGTGCTGCCTACAACATAGGAATTTTCCATTGGAGACCTACCGAGTCTGCAAAAAAATTAGCAAAGGAATGGAAAGAACTGCTTCTAGCTGATGAAAAGATGTGGGATCAGAATggttttaataatattgtacACAAGCAATTAGGACCGTCAGTTGATGAGGATGGTGGACTTGTTTATGCTTATGATGGAAATCTAAAGCTGGGAATTTTGCCTTCAAGCATCTTCTGTAGTGGACATACATATTTTGTCCAGGCTATGTATCAGCAACTCAGATTGGAGCCATATGCAGTGCACACGACATTTCAATATGCAGGCACTGAAGGAAAGCGCCACCGACTGCGAGAAGCCATGCTTTTCCATGATCCACCAGAATACTATAATCCTCCTGGGGGTTTCTTGTTATTTAAGCCATCTATTCCAAAAAGCTTGTTGCTAAGTGGGAAGCATACCATTGAATCTCATTTTACACTAGTTAATTACCAAATAAAACAGATTAGGACAGCACTTGCAATTGCTTCCCTTTTGAACAGAACACTGGTCATGCCTCCACTATGGTGCAGGATTGATAGGCTATGGTTTCCCCACCCTGGTGTTTTGGAGGGGTCTATGACTAGACAACCGTTTCTCTGTCCTTTGGATCATGTATTTGAGGTAAATGTCATGTTGAAAGAACTCCCAGAGGAAGAGTTTGGCCCTGGAATAGACATTAGAGAGTACTCGATACTTGATAATCCCTCACTCCCCTCAGAGGTGAAGAAGTCATGGCTTGATGTTCAGCTCTGTAAGGAAGGAACCCAAGATTGTTTTGCATCAGATAATACCACTGTTGGGGGAGTAATCAAATTTCCAAGGCATAGCAATGAAGAAAcgTACATGAAAGTTTTTTCATCATTCAAGGATGTGAAAGTCATTCAGTTCTCTTCAATGCAAGATGCTTTCACAGGTTTCATCGACAAGGAAAGGGAAGATAGATTCAGAAAACGTGTTAAACGGTACATGGGTATATGGTGCTGCGTGCTGGATCACACTCCCGGTCAcatttattatgatatatactGGGATGAGAAACCTGAATGGAAGCCAATGCCTCCTCAAACTTCCGCAGATGATCATCCACCTTGGTGA 1383 0.4129 MGSHMSTADVGWGSPTFHKMGREKVILINLILPFGFELLMCDTDMVWLKNPLPYLARYPGADVLTSSDQVVPTVVDDSLEIWQEVGAAYNIGIFHWRPTESAKKLAKEWKELLLADEKMWDQNGFNNIVHKQLGPSVDEDGGLVYAYDGNLKLGILPSSIFCSGHTYFVQAMYQQLRLEPYAVHTTFQYAGTEGKRHRLREAMLFHDPPEYYNPPGGFLLFKPSIPKSLLLSGKHTIESHFTLVNYQIKQIRTALAIASLLNRTLVMPPLWCRIDRLWFPHPGVLEGSMTRQPFLCPLDHVFEVNVMLKELPEEEFGPGIDIREYSILDNPSLPSEVKKSWLDVQLCKEGTQDCFASDNTTVGGVIKFPRHSNEETYMKVFSSFKDVKVIQFSSMQDAFTGFIDKEREDRFRKRVKRYMGIWCCVLDHTPGHIYYDIYWDEKPEWKPMPPQTSADDHPPW 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2108 460 Pfam Nucleotide-diphospho-sugar transferase 5 199 IPR005069 -
Ssu2g2108 460 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 1 460 - -
Ssu2g2108 460 PANTHER ARABINOSYLTRANSFERASE XEG113 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2108 Ssu-Chr2 76629834 76637306 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2108 K20784 - gmx:100776463 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2108 2 76629834 76637306 Ssu2g2108 2 76629834 76637306 ECH