Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2105 ATGAGGCCTATCGTAATTCAACCAGAATCAGCAACGGTGGAGCAGTTGAAGACGTTGGGCAGGGAGCTAGCAATGGGCTCCCAGGGCCAGCACTCGAAGGAGTTTCTGGACCTCATAAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTGCTCCGCGAGATCGAGACCCTCAAGCGCCGCATCAGCGACGCCGACACGCCGAAGCGCAAGATGAAGGAGTACATCATACGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCCTCCTTCGGCTACATCCACGCCGTCAAGATGACGCACGACGACGCGCTCCTCCTCAAGCGCACCGGCTACCTCGCCGTCACGCTATTCCTCAGCGACGGCCACGACCTCATCATCCTCATCGTTAACACCATCCAGAAGGACCTCGCCTCGGACAACTACCTCGTCGTTTGCGCCGCGCTTAACGCCGTTTGCAGGCTCATTAACGAGGAAACCATCCCCGCCGTGCTCCCCCGCGTCGTCGACCTGCTTAACCACCCCAAGGACGCCGTTAGGAAAAAGGCCGTTATGGCGCTGCATCGGTTTTACCAGAAATCTCCATCCTCCGTTTCGCATTTGTTATCCAATTTCCGCAAACGCCTCAGCGATAACGATCCCGGAGTAATGGGCGCTTCTCTGTGTCCGCTTTTTCATCTCGTTTCCAACGATGCTGACTCTTATAAGGACCTTGTGGTTAGCTTCGTCAGCATTCTTAAACAAGTTGCAGAACGCAGGTTGCCGAAGACCTATGATTATCACCAAATGCCTGCACCATTCGTTCAGATTAAGTTGCTGAAGATTCTTGCATTGTTGGGAAGTGGTGACAAGCAAGCTAGTGGACACATGTATACTGTGCTGGGTGATATAATTAGGAGGAGTGATTCGATGACGAACATAGGGAATGCTGTTCTCTATGAGTGCATATGCTGTGTGGCTTCTATATATCCCAATCCTAAGTTATTAGAGGCTGCTGCGGATGTAATTGCAAAATTTTTGaagAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAGCAACACCAACTGGCCGTCATCGACTGCTTAGAGGACCCTGATGATAGTCTGAAGCGAAAAACTTTTGAACTGTTACACAAAATGACCAAATCCTCCAATGTGGAAGTGATTGTTGACCGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGACAATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGTCGAATCATATTTGCGCATTATTGCAGAGCCAAAGCTTCCATCTGTGTTTCTTCAAGTCATCTGTTGGGTTCTGGGGGAATATGGAACAGCGGATGGAAAGTATTCTGCTTCCTATATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCTAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCATCGATGAAAATTTATGCGTTTGAAGTAGCAGCTGGGAGGAAAATGGATATCCTACCTGAGTGTCAATCTTTGGTTGAAGAATTATTGGCATCCCACTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAAGTCCTTATACATTTGGATGCACAAGCTATTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGGTGATAAGAATCTTTCTTTCCTCAATGGGTATGTCCAGCAGTCTCTAGAAAGGGGTGCTCAATCCTATATTCCTGAGGATGAGCGCCCTGGAATGGGGAATGTAAACAATTTTAGAAGCCAAGATCATCATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAACTTCCAAAGCCTCCAATGCAACCGAAAGCTGCTCCGGTTTCATTTGCATCCTCAGCAGACATTGTTCCTGTACCCGAGGCATTGTCTTCCGGGGAGATCCCCCAAATCTCATCAGTGGGATCAACGTCAGAGTCTGGCTCCTCAGAGCTTAAGCTACGACTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCAACATATTCATCTCCAACATCATCTGCCTCTGCCTCATATTCTACTTCCCAAAAACCAACGAATTGGGCAACTCAGGTGGATGGTGCTACAGCTGTCAATTCAAAAGTACGCGATAATTATGATTCAAGAAAGACACAGGTTGAGATTTCTCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAACCCGAGAAAGGATCATCTACAAGTCATAAGGTTCCAAAATCCAGTTCAAGTGCTAGTGCTGCAGACGGATCTCAGGGATCAAAGGCTGCAGTTGTACCCAACGAAGTAGCTGTGGAGAAAACAATTCCTCAACCACCTCCTCCTGATTTGCTTGACTTGGGTGAACCAGTTGTCACTACAGCTCCTCCCACTGTCGACCCATTCATGCAATTGGAAGGACTTCTTGACCCAAGCATTAATTCTGCAACAAATCATAACGTAGGTGCTGCTACAAATGCCCCTGATATTATGTCACTCTATGCGGAGACTACTGCCAGTGGTGGCAATTCTATATCTGTGAGTGGGGATAATGTAAATCTTTTATCTGAATTGTCAAATGCAACTCTAAAAGCTACTAGTGGAGAAACAATTGTGACGCCTTTGCCCCAATCTATTAAGGGTCCAAATGCTAAAGATTCTTTGGAGAAGGATGCACTAAGTGATAATGAGGTTAGGTTCATCTATTCCTTCATGGAAAATAGAAATACCGTGGGGCTCATGATTGGACCCGGTTCTGTTTTCTTTGTGGAATTTGCTCTCTCGTCATGTTTTGATATTGTTTATGTTGTCCTTGCTGACATGATTCAGTTGATTTTAGTTCAGTTTCAGTAG 3084 0.4578 MRPIVIQPESATVEQLKTLGRELAMGSQGQHSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRRISDADTPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDGHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHPKDAVRKKAVMALHRFYQKSPSSVSHLLSNFRKRLSDNDPGVMGASLCPLFHLVSNDADSYKDLVVSFVSILKQVAERRLPKTYDYHQMPAPFVQIKLLKILALLGSGDKQASGHMYTVLGDIIRRSDSMTNIGNAVLYECICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLHKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDNDAADSQLRSSAVESYLRIIAEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISASMKIYAFEVAAGRKMDILPECQSLVEELLASHSTDLQQRAYELQVLIHLDAQAIETIMPRDASCEDIEGDKNLSFLNGYVQQSLERGAQSYIPEDERPGMGNVNNFRSQDHHESLQHGLRFEAYELPKPPMQPKAAPVSFASSADIVPVPEALSSGEIPQISSVGSTSESGSSELKLRLDGVQKKWGRPTYSSPTSSASASYSTSQKPTNWATQVDGATAVNSKVRDNYDSRKTQVEISPEKQKLAASLFGGSTKPEKGSSTSHKVPKSSSSASAADGSQGSKAAVVPNEVAVEKTIPQPPPPDLLDLGEPVVTTAPPTVDPFMQLEGLLDPSINSATNHNVGAATNAPDIMSLYAETTASGGNSISVSGDNVNLLSELSNATLKATSGETIVTPLPQSIKGPNAKDSLEKDALSDNEVRFIYSFMENRNTVGLMIGPGSVFFVEFALSSCFDIVYVVLADMIQLILVQFQ 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2105 1027 Gene3D - 21 617 IPR011989 -
Ssu2g2105 1027 MobiDBLite consensus disorder prediction 744 781 - -
Ssu2g2105 1027 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 26 975 - -
Ssu2g2105 1027 Pfam Adaptin N terminal region 62 604 IPR002553 GO:0006886|GO:0016192|GO:0030117
Ssu2g2105 1027 MobiDBLite consensus disorder prediction 741 841 - -
Ssu2g2105 1027 SUPERFAMILY ARM repeat 49 647 IPR016024 -
Ssu2g2105 1027 MobiDBLite consensus disorder prediction 648 670 - -
Ssu2g2105 1027 MobiDBLite consensus disorder prediction 810 835 - -
Ssu2g2105 1027 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 26 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2105 Ssu-Chr2 76485796 76507746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2105 K12400 - gmx:100819573 1624.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2105 2 76485796 76507746 Ssu2g2105 2 76485796 76507746 ECH