Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2102 ATGGAGGACAGTACTATAGGAAGAAATGGTAGCTCTAGAAAGGGTAGCTTCAGGTTGGGGATGGGAGTGGATGCAACAAAAAACCACACTGTGATTGAGCTTGGTAGTATTGACACACAGAGACTTCTTCTAAGcggtggagagagagagaaacaattACAGCCTCTCACTAACTCTCTCTTTCCCAGGCAAATGAAATCCCTGTCTGCTCTTTGTGACACTATTTTACCTTCTGTCAACAACTTTGATGACACCTCCGATGAATCTGTCACCAAGTTCTACCAGATTTCAGCTTCCATGGCAGGAACACCTGAACGTTTTGGGGGTATGATAAGTGAGAAATTGAAACACCCCATGACAGGGTTACTGAAGTTGGTGTTATGGCTGTTGTCTACGTGGTTTGGGACAATAATTTTCTGTGGCATGGCGTGCCTCTCAACCCAATTCCCCTTCGTCCACAGCTACCCTGACTTGTCTCTGCAGAAACGCCAAGAGATTATGCGATCATGGTCTCTAAGTTACCTACGTCACTTTAGAATGCTGTTCAGGACCATCAAACTTCTCACTCTCCTAATCTTCTTTACTcagATAGATGAATCAGAAGACAACGTTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCTCAGTTGAAGAACCACTTCTTACATGGAACATCTAAAGGAGGACAAGAGGATAAGGAAGATGAAGATGCTGAAGAGGTGATAGGACCCCTTTACAAAGGTCTTGTTCATCTGAATTACTCACGAGACATCACTGCAGATGCCCTAAGACGATTTGGATTCCCTGTCTCTGTCATTCGCAGAAAGCATAAAGCTGCTGTAAACTTGTCATCTCCTTCTTTGGTGATACAATGTGATGCAGTGGTGGTTGGTTCTGGCTCAGGAGGTGGAGTAATAGCTGGTGTTCTTGCAAAAGCTGGCTACAAAGTGTTGGTGTTGGAGAAAGGAGGCTATTCTGCTAGGAACAATCTTTCCCTTCTTGAAGGACTAACCATGGATCAAATGTACCTCAATGGTGGTATGGTTGCAACTGATGATATGGGTGTGTTCATTCTATCAGGATCCACTGTTGGTGGAGGGTCAGCAATCAACTGGTCTGCATGCATTAAAACCCCTCAGCATGTGTGCAAGGAGTGGTGTGATAAACATGGGCTAGAGTTGTTTGAAAGTGAACTGTATAGAGAAGCTATGGATGCTGTCTGTGAGAAGATGGAAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCAATCCTAAGAAGAGGGTGTCAAGAAATGGGGTATCCTCTTAGTAACATTCCTAGGAATTCTCCATCAGATCACTACTGTGGCTGGTGTTGCATGGGTTGTAAGGATGGGAGGAAGAAGGGTACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGCAATGGAGCAATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGcacaagaaaaaggaaggaagggATAGAAAGATTGCACATGGAGTGGCTTTTGAATATGAATATAAAGGAACTAAAGACATTTGTGTGGTGGAGGCCAGGGTCACAATTGTAGCATGTGGAGCACTGAGTACTCCAGCATTGCTTAAAAGAAGTGGCTTAAGGAATCAGAACATAGGGAGGCACTTGCATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCAGATGCACCTGCATCTGAGGTGTGGCCGGAAGCATATAAGAAGAGCTATGAAGGGGGGATAATGACAGCAATGTCTCCTGTTGTTGCGGAGTTTGAACAATCTGGATATGGTGCACTGATCCAAACACCTGCATTGCATCCTGGTATGTTCTCAGTTGTCACACCATGGACTTCTGGAATCAATATAAGAGATCGAATGCGAAAGTTTTCTAGAACAGCTCATATATTTGCACTGGCAAGGGATCAAGGATCGGGGACGGTGGAATCATCACACCGTATCAGTTATCAGCTGGCAGATGCAGATGAAGAGCATTTAAAGAAAGGAATTGATAAGGTGCTGAGAATTCTGGCAGCAGCTGGAGCGGAAGAAATTGGGACTCATCATAATAAGGGAAGGACCTTAAAAGTAAACCAGGTGAGCTATCATGAGTTTGAGAAATTTGTTAAGGAGGAAAGTTCAAGGCCATTGACAGACCTTTCAACACCATTGTGCTCAGCACATCAGATGGGGAGTTGCCGGATGGGTTCTAATGCAAAGCAATCAGTGGTGAGTCAGACAGGGGAGACATGGGAAGTGGAGGGCCTTTATGTGGCAGATGCAAGTGTCTTCCCCACAGCTTTGGGTGTGAATCCAATGGTTACTGTTCAAGCTATTGCTTATTGCACAGCACAATCTGTTGTTGAAGTTCTTAGAAGGAAAAGAAGtagatga 2427 0.4339 MEDSTIGRNGSSRKGSFRLGMGVDATKNHTVIELGSIDTQRLLLSGGEREKQLQPLTNSLFPRQMKSLSALCDTILPSVNNFDDTSDESVTKFYQISASMAGTPERFGGMISEKLKHPMTGLLKLVLWLLSTWFGTIIFCGMACLSTQFPFVHSYPDLSLQKRQEIMRSWSLSYLRHFRMLFRTIKLLTLLIFFTQIDESEDNVSWKAIGYCGPDPEFKAQLKNHFLHGTSKGGQEDKEDEDAEEVIGPLYKGLVHLNYSRDITADALRRFGFPVSVIRRKHKAAVNLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGLTMDQMYLNGGMVATDDMGVFILSGSTVGGGSAINWSACIKTPQHVCKEWCDKHGLELFESELYREAMDAVCEKMEVQSEIEDEGFNNAILRRGCQEMGYPLSNIPRNSPSDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKEGRDRKIAHGVAFEYEYKGTKDICVVEARVTIVACGALSTPALLKRSGLRNQNIGRHLHLHPVTMAWGYFPDAPASEVWPEAYKKSYEGGIMTAMSPVVAEFEQSGYGALIQTPALHPGMFSVVTPWTSGINIRDRMRKFSRTAHIFALARDQGSGTVESSHRISYQLADADEEHLKKGIDKVLRILAAAGAEEIGTHHNKGRTLKVNQVSYHEFEKFVKEESSRPLTDLSTPLCSAHQMGSCRMGSNAKQSVVSQTGETWEVEGLYVADASVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKRSR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2102 808 Gene3D - 282 602 IPR036188 -
Ssu2g2102 808 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 17 807 - -
Ssu2g2102 808 MobiDBLite consensus disorder prediction 1 20 - -
Ssu2g2102 808 PIRSF Lg_Ch_AO 48 808 IPR012400 GO:0046577
Ssu2g2102 808 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
Ssu2g2102 808 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 17 807 - -
Ssu2g2102 808 SUPERFAMILY FAD/NAD(P)-binding domain 296 804 IPR036188 -
Ssu2g2102 808 Gene3D - 721 805 IPR036188 -
Ssu2g2102 808 Pfam GMC oxidoreductase 660 793 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2102 Ssu-Chr2 76457630 76466598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2102 27 802 Acyl Lipid Metabolism Gene Families AT4G19380 56.505 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2102 K17756 - gmx:100775376 1459.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2102 2 76457630 76466598 Ssu2g2102 2 76457630 76466598 ECH