Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2098 ATGGTGATCCACCCTAGAATCCCCGTCATCAGCGTCACCAATGCGCACCTGGACCTTCTCAGCAACGACTACGCGGGCCTCCTCCAAACCCAACTCACCATTATTGTTCTGGCCCAGAACGGGAACGCCAAGGCCCACTCGACGTTTTCGGACATAAAGTTCAACCTCAGTTATCAGGGCCAGGGCATTGCGGTGATGATTGCCGAGCCGTTTGAGGTACCTAAGAACAGTTCCAAGACGCTCAGCTACGTCGTTCAGTCTGCCTCCATTCCCTTAACTCCTGAACAGATGGAGGACGTGGACCAGTCCTGGAAGCGTGATGTGATAGGGTTTGACTTGAAGGGAAGCGCGAGGACGCGGTGGAGAGTAGGGCCCTTAGGTTCTGTTAAGTTCTGGTGCAACTTGGAGTGTCGACTCAAGTTTCGCCCCTCCAACGGGAGTTACATTCGCTCGCGCTGCACCTCTGAGTCCAAATGA 477 0.5451 MVIHPRIPVISVTNAHLDLLSNDYAGLLQTQLTIIVLAQNGNAKAHSTFSDIKFNLSYQGQGIAVMIAEPFEVPKNSSKTLSYVVQSASIPLTPEQMEDVDQSWKRDVIGFDLKGSARTRWRVGPLGSVKFWCNLECRLKFRPSNGSYIRSRCTSESK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2098 158 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 158 - -
Ssu2g2098 158 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 158 - -
Ssu2g2098 158 Pfam Late embryogenesis abundant protein 37 137 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2098 Ssu-Chr2 76355087 76355563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2098 - - gmx:100819030 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2098 2 76355087 76355563 Ssu2g2098 2 76355087 76355563 ECH