Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2084 ATGAGCTCCTCACCAGCATTTCCCAAGTTCGTTTCCGTAGAAGGCGCCGACATACATTCCAGAAGTAAACCTGACGGCTTCAGATTCAGTCTTGTCTCGTATAACATATTGGCTCAGGCATATGTGAAGAGCTCGCTGTTCCCACACTCTCCTTCCTCATGTCTCAAATGGAAACTTCGTTCAAACACAATTTTGGCAGTTCTCAAGAACTTGGGAGCTGATTTTTTCTGCCTACagGAAGTTGATGAATTTGAAAGCTTTTACAAAGGAAACATGAAGGATCTAGGAtactcttctatttatatgaaGAGAAGTGGACAGAAGCGTGATGGATGTGGGTTATTTTACAAGCATGACCGTGCAGAGTTGGTCTTAGAGGAGAAAATTGAATACAATGATCTTGTAAAGTCAGTTCCCGATGGGAATTCTTCAAATGATGATGAACACATCAATATCCAGATTGTCCAGCCTGATAAACAAAAGGATGTGGCACCCAAAAATGGATCTAAATCGAATACAGAAGATTGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGACTGTGTTGGAATTATGGCTGCATTCAAACTCAAAGATCCCTCTTGTCATATTATTGTGGCTAACACACATCTTTATTGGGATCCTGAGTGGGCTGATGTCAAGCTTGCACAAGCTAAATATCTTCTATCCCgtttagcaaaatttaaaacactggTATCAGATAGATATGAATGCATACCTGAAGTCATTGTGGCTGGTGACTTCAATTCTACGCCAGGAGATATGGTTTATCAGTACCTTGTATCAGGCAATCCTTCATCAAACCTGATTCCGAACTATTTAGAGGAGCCTCTTATTCCCTTATGTAGTGTCTATGCTTCTACAAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACACTCGACTATATATTACTTTCCCCTTCAGATCACATTAAACCAATTAGTTTTCTTGAGCTTCCAGACTCTGATGCAGCCGATATTGTTGGTGGACTGCCAAACTTCAGTTATCCAAGTGATCATCTACCAATTGGTGCTGAGTTTGAAATCATCAAGGAATAA 1101 0.3978 MSSSPAFPKFVSVEGADIHSRSKPDGFRFSLVSYNILAQAYVKSSLFPHSPSSCLKWKLRSNTILAVLKNLGADFFCLQEVDEFESFYKGNMKDLGYSSIYMKRSGQKRDGCGLFYKHDRAELVLEEKIEYNDLVKSVPDGNSSNDDEHINIQIVQPDKQKDVAPKNGSKSNTEDCGDPNDPRVRLKRDCVGIMAAFKLKDPSCHIIVANTHLYWDPEWADVKLAQAKYLLSRLAKFKTLVSDRYECIPEVIVAGDFNSTPGDMVYQYLVSGNPSSNLIPNYLEEPLIPLCSVYASTRGEPPFTNYTPGFTGTLDYILLSPSDHIKPISFLELPDSDAADIVGGLPNFSYPSDHLPIGAEFEIIKE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2084 366 Gene3D Endonuclease/exonuclease/phosphatase 6 366 IPR036691 -
Ssu2g2084 366 SUPERFAMILY DNase I-like 28 363 IPR036691 -
Ssu2g2084 366 MobiDBLite consensus disorder prediction 157 181 - -
Ssu2g2084 366 Pfam Endonuclease/Exonuclease/phosphatase family 32 324 IPR005135 GO:0003824
Ssu2g2084 366 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 5 365 - -
Ssu2g2084 366 PANTHER BNAC08G09040D PROTEIN 5 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2084 Ssu-Chr2 75894573 75898546 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2084 K12603 - gmx:100775932 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2084 2 75894573 75898546 Ssu2g2084 2 75894573 75898546 ECH