Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2074 ATGACGAGAGGAAAGCAGAAGATCGAAGCGCAGAGGCGAAACGCAGAGAAGAATCAGAAGTCAAAGGGCTCTCAGCTCGAGGCCAGAGCCGTTGGCCTGAAAGTCACCTGCCCCATCTGCAagATCCAACTTGCAAATCAAAACCAACTTGGTGATCATTATACCTCCAAACATCCGAGGGAGAAACCCCCTTCAGAGTCAAGCTAA 207 0.4976 MTRGKQKIEAQRRNAEKNQKSKGSQLEARAVGLKVTCPICKIQLANQNQLGDHYTSKHPREKPPSESS 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2074 68 Pfam Zinc-finger of C2H2 type 36 57 - -
Ssu2g2074 68 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Ssu2g2074 68 PANTHER GEO09665P1-RELATED 1 66 - -
Ssu2g2074 68 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 63 IPR013087 -
Ssu2g2074 68 MobiDBLite consensus disorder prediction 47 68 - -
Ssu2g2074 68 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 64 - -
Ssu2g2074 68 Gene3D - 1 66 IPR026939 -
Ssu2g2074 68 MobiDBLite consensus disorder prediction 1 28 - -
Ssu2g2074 68 MobiDBLite consensus disorder prediction 1 23 - -
Ssu2g2074 68 PANTHER GEO09665P1-RELATED 1 66 IPR045230 -
Ssu2g2074 68 MobiDBLite consensus disorder prediction 54 68 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2074 - - minc:123222304 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2074 2 75596809 75599972 Ssu2g2074 2 75596809 75599972 ECH