Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2065 atgatgatgatgatgagccGCGGTGGCACCAACCGTGTGGCCAACGCTGCACTGTTGGCTGCGAAGGGTGTAAGCGGTGAAGTTGGTGGGGTTAGAGCAGTTTATGGCGGTGGTGTAAGGAGCGAGAGCACTTTGGCTTTGTCAGAGAAGGAGAACAATCATCATGTTGGAGAGAAGAAGGTTGATTTGTCTTCTGCTGGTGGGAACAAAGAGGACAATGGGATCGTGAGTTATTGGGGCATTCAGCCCTCTAAGATCACCAAACAGGATGGCACAGAATGGAAGTGGAATTGCTTTAGGCCATGGGAGACGTACAAAGCAGATGTTTCCATTGATCTGGAGAAGCACCATGCGCCAGTCACGTTTCTGGACAAGATGGCTTTTTGGACGGTCAAAGCTCTTAGATACCCCACCGACATGTTTTTCCAGAGGCGATATGGATGTCGAGCAATGATGCTTGAGACTGTGGCAGCAGTCCCTGGGATGGTAGGAGGCATGCTATTGCACTGCAAATCCCTTAGAAGATTTGAGCACAGTGGTGGTTGGATCAAAGCACTGTTAGAAGAAGCAGAGAATGAGCGCATGCACCTAATGACGTTTATGGAAGTGGCAAAGCCAAAGTGGTATGAGCGTGCTCTGGTGATAACTGTGCAAGGTGTTTTCTTCAATGCATACTTCTTGGGGTATTTGCTCTCACCTAAATTTGCACACCGCATGGTTGGTTACCTTGAGGAGGAGGCAATACACTCCTACACAGAGTTCCTCAAGGAGCTGGACAAGGGCAATATAGAAAATGTGCCAGCTCCAGCCATTGCCATTGACTATTGGCAGCTCCCTCCAGACTCTACTTTAAGGGATGTTGTCATGGTTGTTAGAGCTGATGAGGCACATCATCGTGATGTCAACCATTTTGCATCGGACATACACTACCAAGGACGAGAGTTAAGAGAGGCTGCTGCTCCAATTGGTTATCACTAG 978 0.4765 MMMMMSRGGTNRVANAALLAAKGVSGEVGGVRAVYGGGVRSESTLALSEKENNHHVGEKKVDLSSAGGNKEDNGIVSYWGIQPSKITKQDGTEWKWNCFRPWETYKADVSIDLEKHHAPVTFLDKMAFWTVKALRYPTDMFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPDSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2065 325 Pfam Alternative oxidase 115 305 IPR002680 GO:0009916
Ssu2g2065 325 PANTHER UBIQUINOL OXIDASE 36 325 - -
Ssu2g2065 325 PANTHER ALTERNATIVE OXIDASE 36 325 IPR002680 GO:0009916
Ssu2g2065 325 CDD AOX 142 309 IPR002680 GO:0009916
Ssu2g2065 325 Gene3D Alternative oxidase 76 321 IPR038659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2065 Ssu-Chr2 75351114 75357493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2065 15 325 Miscellaneous Gene Families AT3G22370 78.056 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2065 K17893 - gmx:547924 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2065 2 75351114 75357493 Ssu2g2065 2 75351114 75357493 ECH