Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2064 ATGGCTTCTGCATCAGGGTGTCCACCATTTGAATTTTCTAGCAAGTATTATCATGTATCTGAAAATGGAGGTGTGTGTGTGAGGCAGACCAGTTTCTTTGAAGGCAAACCAGTGCTTAATCAGGGAGTTGGCTACTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCTGTCTTCACCTCTTTCTTGGTGTGGCTGGAGAAGCGGTATGTTGGGTCACGTCACACATCTGAATGGTTCAATACAGCAGGTAGAAGTGTTAAGACGGGGCTTATTGCTAGTGTCATTGTATCTCAGTGGACATGGGCTGCTACAATCCTGCAAAGCTCTAATGTTGCATGGGAGTATGGGGTTAGTGGACCTTTCTGGTATGCTAGTGGGGCTACCATCCAGGTATTGCTGTTTGGAATCATGGctatagagattaaaagaaaGGCTCCTCATGCTCATACTGTGTGTGAAATTGTCAAAGCCCGTTGGGGGACTTCTGCGCACGttgttttcctctttttctgCTTCTTGACGAATATAATTGTGACGGCTATGTTGCTCCTTGGTGGTTCTGCGGTTGTAAACGCATTAACTGGAGTGAACCTTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTATACATTAGCAGGTGGACTGAAGGCCACATTCTTAGCAAGCTATATCCATTCTGTCATAGtGCACATTGTTTTGGTAATTTTTGTCTACCTTGTCTATACGGCTAGCAGCGAGCTTGGTAGCCCTTCTGTTGTTTACAATCACCTGCTAGAGGTAGCAAGCAAATCAAGAACATGTCAGGATCCTATATCACACCAAGGGCAATCTTGTGGTCCTGTTAGTGGGAATCACGAAGGTTCTTACCTAACAATGCTTAGTTCAGGTGGCTTAGTTTTTGggattataaatattgttggcAACTTTGGCACTGTGTTTGTTGACAATGGATATTGGGTGAGTGCCATCGCTGCAAGACCTTCATCAACTCATAAGGGCTACTTGTTGGGAGGCTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCCACATCATTAGGTCTAGGAGCCTTGGCCCTTGATTTACCCATAAATGAAAGTGAGGCTGGTCGTGGACTTGTTCCCCCTGCTACAGCAATAGCTTTGATGGGGAAAGGAGGATCTATTCTTCTTCTTACAATGCTTTTCATGGCAGTGACTTCTGCTGGTTCATCAGAGCTAATTGCGGTGTCCTCATTATGTACGTATGATATCTATCGAACTTACATAAATCCTAATGCAAGTGGAAAGAAAATCCTCAAAGTGTCAAGGGGTGTTGTCCTAGGCTTTGGGTGTTTCATGGGGTTGCTAGCAGTTATACTGAACAAGGCTGGAGTTTCATTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGCTCAGCAGTTCTTCCTATTGCTTTTATGCTTCTGTGGAGAAAAGCAAATGCAACTGGAGCCATTCTTGGAACAGTGTTAGGTTGTGTTTTAGGAATTATCACATGGTTGTCTGttacaaaaatacaatatgGCCGGATAAACCTCGACACAACTGGCAGAAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTAACTGGAGGAGTTGTTCATGCTATCTGCAGCATGTTGTGGCCTCAGAACTATGACTGGAGTACCACCAAGCAAATCACAGTGGTTGAAAAGGAAACGACTAACGTGCCAGCAGAAGAGtttaaagaagaaaagttaGTAAGAGCTAAAGCATGGGTGGTGAAGTGGGGTGGTGGTTTCACTGTTTTGATAGTCATACTATGGCCTATTCTCTCCCTCCCAGAAGGGGAGTTTAGTAAGGGCTACTTCTATTTCTGGGCAGTGATTGCTATAGGATGGGGTACTGTTGGTTCTGCTGTGATAATTGTTTTACCACTAATGGAGAGGTGGGAAACCATACAGACCGTCATTATGGGCATGTTTACAAATGACAGGCTTATGGAAAAGGTGGAAGAGTTAAATTTCAAGTTGCAGACAATCATGCAGGCAATACCAGAAGCAGAGAGACTTTACTTGCTTGAGAAGGAGAAGGCCAAAAAGATAGAAGCCTCAGAACAACAGGCTTGTTCTCTTCCTGCATAA 2142 0.4272 MASASGCPPFEFSSKYYHVSENGGVCVRQTSFFEGKPVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTSAHVVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNHLLEVASKSRTCQDPISHQGQSCGPVSGNHEGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINESEAGRGLVPPATAIALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILKVSRGVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANATGAILGTVLGCVLGIITWLSVTKIQYGRINLDTTGRNAPMLAGNLVSILTGGVVHAICSMLWPQNYDWSTTKQITVVEKETTNVPAEEFKEEKLVRAKAWVVKWGGGFTVLIVILWPILSLPEGEFSKGYFYFWAVIAIGWGTVGSAVIIVLPLMERWETIQTVIMGMFTNDRLMEKVEELNFKLQTIMQAIPEAERLYLLEKEKAKKIEASEQQACSLPA 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2064 713 PANTHER UREA ACTIVE TRANSPORTER 26 689 - -
Ssu2g2064 713 TIGRFAM sss: transporter, solute:sodium symporter (SSS) family 79 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Ssu2g2064 713 Pfam Sodium:solute symporter family 80 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Ssu2g2064 713 ProSiteProfiles Sodium:solute symporter family profile. 44 516 IPR001734 GO:0016020|GO:0022857|GO:0055085
Ssu2g2064 713 Coils Coil 663 683 - -
Ssu2g2064 713 CDD SLC5sbd_DUR3 45 554 - -
Ssu2g2064 713 Gene3D Sodium/glucose cotransporter 68 611 IPR038377 -
Ssu2g2064 713 PANTHER - 26 689 IPR031155 GO:0015204|GO:0016021|GO:0071918
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2064 7 702 Organic Solute Cotransporters AT5G45380 78.317 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2064 K20989 - gmx:100784391 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2064 2 75330893 75334138 Ssu2g2064 2 75330893 75334138 ECH