Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2056 ATGGTCATGCAGGAGGATTTTGAGCAGTATGCTGAGAAAGCCAAGACTTTGCCAAATaatcaaacaaatgaaaacTTGCTTATCCTTTATGGATTGTACAAGCAGGCCACTGTTGGACCTATCAACACCACCCGTCCTGGTGTGTTCAACATGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCAATGAATGATTACATCACTAAGGTGAAACAGCTGCTGGAAGAAGCTGGCATGCCTGCTTGA 273 0.4359 MVMQEDFEQYAEKAKTLPNNQTNENLLILYGLYKQATVGPINTTRPGVFNMRDRAKWDAWKAVEGKSKEEAMNDYITKVKQLLEEAGMPA 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2056 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Ssu2g2056 90 Gene3D - 1 90 IPR014352 -
Ssu2g2056 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Ssu2g2056 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Ssu2g2056 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Ssu2g2056 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Ssu2g2056 90 PANTHER BNAA08G07670D PROTEIN 1 85 - -
Ssu2g2056 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 85 - -
Ssu2g2056 90 CDD ACBP 3 87 IPR000582 GO:0000062
Ssu2g2056 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Ssu2g2056 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2056 1 90 Acyl Lipid Metabolism Gene Families AT1G31812 68.889 5.38e-43 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2056 K08762 - gmx:100500327 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2056 2 74987671 74988182 Ssu2g2056 2 74987671 74988182 ECH