Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2050 ATGAAATTGAGGATTGCTGCTGCTAACAGACAAGCTTCCATTCAAATGGGGGAGTTCACCGGGGGTGAGTATGTGACTGTCGGTGAATTACCTTCCTCCATGGCAAATCACTCAAGGAAAGTTTCAGTTCTTCCTCTTGTGTTTCTCATCTTCTATGAGGTTTCAGGGGGGCCTTTTGGGGTGGAGGATACTGTGCAGGCAGCTGGTCCTCTCTTAGCCCTCCTTGGATTCTTGGTTTTCCCATTGATATGGAGTGTTCCTGAAGCTTTGATCACTGCCGAGATGGGTACCATGTTCCCTGAAAACAGTGGTTATGTGGTTTGGGTTTCCTCTGCTTTGGGTCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCTTTATACCCAGTTCTGTTTCTTGATTATCTGAAGTCAGGAATCCCAGCTTTGGGTGGTGGGTTGCCTAGAGTTGTTGCAACTTGGGGTCTGACTATAGTTCTCACTTACTTGAACTATAGGGGTTTGACCATTGTGGGATGGGTTGCTGTTTGTTTGGGGGTTTTCTCACTCCTCCCTTTTGTGGTTATGGGGTTCTTGGCAATTCCAGACCTAAAGCCTTCAAGATGGGCTGTGGCAAATCTGAATGATGTTGACTGGAATTTGTATCTGAATACTCTATTTTGGAATCTTAACTATTGGGACTCCATAAGTACTCTTGCTGGAGAAGTGGAAAATCCGAAGAAAACTCTTCCGAGGGCTTTGTTTTATGCCGTGATTCTGGTGGTTCTAGGGTACTTCTTTCCACTTCTAATTGGTACTGGTGCTGTTCCGGTTAATCGTGAGTTGTGGACGGATGGCTACTTCTCAGATATTGCTTTGATTATTGGAGGAGCATGGTTGAGATGGTGGCTTCAGGCCGCTGCTGCGATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGCAGTGATTCTTTCCAGCTTCTGGGGATGGCTGAGAGGGGAATGTTGCCTGAGTTCTTCAGCAAGAGGTCTCGCCATGGAACACCACTCATAGGAATACTCTTTTCAGCATCTGGTGTGATTTTACTATCATGGCTGAGCTTTCAAGAAATTGTAGCCGCAGAGAATTTCTTGTACTGTTTTGGAATGATTTTGGAGTTTATTGCATTCATTCTGTTGAGGATCAAACACCCCAATGCATCTCGGCCTTACAAGATACCAGGGGGAACGGCTGGAGCAATTCTCATGTGTATCCCTCCTACAATAttgatttgtgttgtgttgtttttCTCCTCCCTTAAAGTAATGGTTATAAGCCTTATTGCTATGGCAATTGGCTTTGTGATGCAGCCTTGCCTCAAATTTATGGAGAAAAAGAGATGGATGAAGTTTTCCCATAGTTCTGAGCTCCCTGATTTTGGCAATCAGGAGGACACTCGCTCTTTGGTGCATTAA 1458 0.4451 MKLRIAAANRQASIQMGEFTGGEYVTVGELPSSMANHSRKVSVLPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLVFPLIWSVPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGIPALGGGLPRVVATWGLTIVLTYLNYRGLTIVGWVAVCLGVFSLLPFVVMGFLAIPDLKPSRWAVANLNDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPRALFYAVILVVLGYFFPLLIGTGAVPVNRELWTDGYFSDIALIIGGAWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFSKRSRHGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFIAFILLRIKHPNASRPYKIPGGTAGAILMCIPPTILICVVLFFSSLKVMVISLIAMAIGFVMQPCLKFMEKKRWMKFSHSSELPDFGNQEDTRSLVH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2050 485 PANTHER POLYAMINE TRANSPORTER PUT1 8 485 - -
Ssu2g2050 485 PIRSF AA_transporter 21 478 - -
Ssu2g2050 485 PANTHER POLYAMINE TRANSPORTER PUT1 8 485 IPR044566 GO:0022857
Ssu2g2050 485 Pfam Amino acid permease 48 432 IPR002293 GO:0016020|GO:0022857|GO:0055085
Ssu2g2050 485 Gene3D Amino acid/polyamine transporter I 35 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2050 Ssu-Chr2 74267968 74269938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2050 16 482 Organic Solute Cotransporters AT1G31830 75.316 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2050 - - gmx:100816567 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2050 2 74267968 74269938 Ssu2g2050 2 74267968 74269938 ECH