Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2039 ATGAAGCATAAAGATGGGAAACCAATCAACCAGCCAAACAAGAACCGGGCTGTGACTTTGGCAGTCACTCTTATTGCTCTATGtggtttttccttttatctGGGAGGAATCTTCTGTTCTGGGAAGGATGGGGTTGTGGTCAATACCATTCAGAAGACCCTTGAATCTCCTAAGCAATCCTCAGGTTCTCTGCAAATTAAGCCCATCAGTTTCCCTGAATGCGGCATGGACTATCAAGACTACACCCCATGCACAGATCCAAAGAGATGGAGAAAGTATGGCACGTATCGGCTTACTTTGTTAGAACGCCATTGCCCTCCAATTTTTGAGAGGAAAGAATGCTTGGTTCCTCCCCCAGATGGATACAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAAAGTTGGTACAGGGGGGGTACTATGTTCCCCAATGGTGTTGGTGAATATGTTGATTTGATGCAAGATCTAATCCCAGAAATGAAAGATGGGACCGTACGAACTGCAATTGATACTGGTTGTGGGGTTGCTAGCTGGGGTGGTGACTTGTTGGATCGTGGGATTCTAACAGTTTCTCTTGCCCCAAGAGATAACCATGAAGCTCAAGTTCAATTTGCTCTAGAGCGTGGTATCCCAGCTATTCTTGGTGTCATTTCTACACAGAGACTTCCTTTCCCATCAGACTCCTTTGATATGGCTCATTGCTCCAGATGCCTTATCCCATGGACAGAATTTGGTGGTATTTATCTCATGGAAATACACCGTATTCTTCGTCCTGGAGGATTTTGGGTTTTGTCTGGTCCACCTGTCAACTACGAGCGCAGGTGGCGTGGATGGAACACAACTGTGGAAGAGCAAAGATCAGATTATGAGAAGTTGCGGGATTTACTTACTTCAATGTgctttaaattatacaataaaaaggaTGACATTGCTGTATGGCAGAAGGCTAAAGACAACAGTTGCTATGAGAAGCTGGCTAGAGATACATATCCACCAAAGTGTGATGACAGCCTTGAACCAGATTCAGGATGGTACACTCCACTTCGTGCTTGTTTTGTGGTTCCAgatcaaaaatataagaaatcagGTCTCACGTACATGCCTAAGTGGCCCGAACGGTTGCATGCTACCCCTGAAAGGGTGACAACTGTTCATGGTACTAGTACTAGTACTTTCAGTCATGATAGTGGCAAGTGGAAAAAACGCATTCAGCACTACAAGAAGTTGTTGCCGGACCTTGGCACTGACAAGATAAGAAATGTCATGGACATGAATACAGTGTATGGAGGTTTTGCTGCAGCCTTGATCAATGATCCCTTATGGGTCATGAATGTGGTCTCAGCTTATGGTCCCAACACACTTCCTGTGGTTTATGATCGAGGCCTTATTGGAACCTTCCATGACTGGTGTGAAGCTTTTTCAACCTATCCTCGTACATATGACCTCCTTCATCTTGATGGACTATTCACTGCAGAAAGCCACAGATGTGAAATGAAGTATGTGTTGTTGGAAATGGACCGAATTTTAAGACCTGGTGGGCATGCTATCATTCGAGAGTCCGCTTATTTTGTGGATGCCATTGCTACTATTGCCAAGGGCATGCGATGGGGATGTCGCAAAGAAAACACCGAGTATGGAGTTGACAAAGAGAAGATTTTGATATGCCAGAAAAAGCTATGGCAGTCATCCAACAAAGGTTCAAGATGA 1710 0.4351 MKHKDGKPINQPNKNRAVTLAVTLIALCGFSFYLGGIFCSGKDGVVVNTIQKTLESPKQSSGSLQIKPISFPECGMDYQDYTPCTDPKRWRKYGTYRLTLLERHCPPIFERKECLVPPPDGYKPPIRWPKSRDESWYRGGTMFPNGVGEYVDLMQDLIPEMKDGTVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSDSFDMAHCSRCLIPWTEFGGIYLMEIHRILRPGGFWVLSGPPVNYERRWRGWNTTVEEQRSDYEKLRDLLTSMCFKLYNKKDDIAVWQKAKDNSCYEKLARDTYPPKCDDSLEPDSGWYTPLRACFVVPDQKYKKSGLTYMPKWPERLHATPERVTTVHGTSTSTFSHDSGKWKKRIQHYKKLLPDLGTDKIRNVMDMNTVYGGFAAALINDPLWVMNVVSAYGPNTLPVVYDRGLIGTFHDWCEAFSTYPRTYDLLHLDGLFTAESHRCEMKYVLLEMDRILRPGGHAIIRESAYFVDAIATIAKGMRWGCRKENTEYGVDKEKILICQKKLWQSSNKGSR 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2039 569 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 138 IPR004159 GO:0008168
Ssu2g2039 569 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 139 567 IPR004159 GO:0008168
Ssu2g2039 569 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 80 138 IPR004159 GO:0008168
Ssu2g2039 569 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 139 558 IPR004159 GO:0008168
Ssu2g2039 569 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 395 548 IPR029063 -
Ssu2g2039 569 Gene3D Vaccinia Virus protein VP39 131 323 IPR029063 -
Ssu2g2039 569 PANTHER PMT16, PUTATIVE-RELATED 1 138 - -
Ssu2g2039 569 PANTHER PMT16, PUTATIVE-RELATED 139 567 - -
Ssu2g2039 569 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 307 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2039 Ssu-Chr2 74048217 74051069 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2039 - - gmx:100810681 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2039 2 74048217 74051069 Ssu2g2039 2 74048217 74051069 ECH