Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2022 aTGGAAAAGAGCAGAGTGCTTATTGTTGGGGGAAGTGGGTACCTAGGAAAGAGGTTGGTAAAGGCAAGTTTAGCTGAGGGACATGAAACATTTGTCCTTCACAGGCCAGAGATTGGCGTTGACATTGAGAAAGTTCAGCTGCTCTTGTCATTCAAGGAGCAAGGGGCTAGGCTCGTGTCAGGTTCCTTTCACGACCATCGGAGCCTAGTGAATGCTGTAAAACTAGTTGATGTTGTCATTTGTGCAATATCCGGTGTTCACATCCGCAGCCACCAAATCCTCctccaacttaaacttgttgaCGCAATAAAAGAATCTGGAAATATCaagAGATTTTTGCCCTCAGAGTTTGGGACAGATCCTGCAAGAATGGCACATGCATTGGAGCCTGGAAGAGTAACATTTGAAGACAAAATGGTAGTAAGAAAGGCCATTCAAGAGGCTGACATACCATTCACCTATATTTCTGCTAATTGCTTTGCTGGTTACTTTCTTGGGGGCCTGTGTCAGCCGGGGTTTATAATTCCCTCTACGGATTCTGTGGTCTTGTTTGGAGATGGAAACGTAAAGGCAATCTATGTGGATGAAGATGATATAGCCATGTACACTATCAAAGCCATAGATGACCCAAGAACTCTAAACAAGACCGTTTACATAAGGCCACCTGAAAACATATTATCCCAGAGAGAGGTGGTCCAAATTTGGGAGAAACTGATCGGGAAAGAGTTGCAGAAATCTTCAATTTCTGCAGAACAGTTTCTGAGTTCCGTGGAAGGAATATCATATGAGCAGCAAGTGGGAATGGGGCATTACTATCATGTTTGCTTTGAAGGTTGCCTCGCAAATTTTGAGATAGGAGAAGAAGGGGTTGAAGCTTGTGGATTGTACCCCCAAATAAAGTACACTACCGTTGAAGAGTACATGAAACGCTATGTATAG 939 0.4271 MEKSRVLIVGGSGYLGKRLVKASLAEGHETFVLHRPEIGVDIEKVQLLLSFKEQGARLVSGSFHDHRSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKESGNIKRFLPSEFGTDPARMAHALEPGRVTFEDKMVVRKAIQEADIPFTYISANCFAGYFLGGLCQPGFIIPSTDSVVLFGDGNVKAIYVDEDDIAMYTIKAIDDPRTLNKTVYIRPPENILSQREVVQIWEKLIGKELQKSSISAEQFLSSVEGISYEQQVGMGHYYHVCFEGCLANFEIGEEGVEACGLYPQIKYTTVEEYMKRYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2022 312 Pfam NmrA-like family 6 260 IPR008030 -
Ssu2g2022 312 Gene3D - 4 297 - -
Ssu2g2022 312 PANTHER PINORESINOL REDUCTASE-RELATED 2 311 - -
Ssu2g2022 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 269 IPR036291 -
Ssu2g2022 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Ssu2g2022 312 PANTHER BIFUNCTIONAL PINORESINOL-LARICIRESINOL REDUCTASE-LIKE 2 311 - -
Ssu2g2022 312 Gene3D - 158 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2022 Ssu-Chr2 73560464 73561900 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2022 K21568 - gmx:100780465 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2022 2 73560464 73561900 Ssu2g2022 2 73560464 73561900 ECH