Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2021 ATGACAGGTCTTTATATAGATGGCCTCAGCAGGTCCATTTTGCGAGAGTCAAACCAACCAGCAGCCAGAGGAGAAGCAATGGAAAAGAGCAAGGTTCTCGTTGTGGGGGGCACTGGGTATGTTGGGAGGAGGATAGTGAAGGCAAGTCTAGAACAGGGCCATGAAACCTATGTCCTTCAACGTCCAGAGATAGGTCTGGACATTGAGAAGGTGCAGATGCTGCTTTCATTCAAGAAGCAAGGTGCTCGTCTCGTGGAGGCTTCTGTCTCCGATCACCACAGCCTGCTGGATGCTGTGAAACTCGTGGATGTTGTGATCTGCACCATGTCTGGGGTTCACTTTCGCTCTCACAACTTGTTGATGCAGCTCAAACTTGTCGAGGCCATCAAGGCTGCAGGGAACGTCAAGCGTTTCCTGCCTTCAGAATTTGGCATGGACCCAGCACTTATGGGACATGCACTTGAACCGGGAAGAGTCACATTCGATGAGAAAATGACCGTAAGGAAAGCAATTGAGGATGCCAACATCCCTTTCACTTACATCTCTGCTAATTGCTTCGCGGGCTACTTCGCTGGTAACCTCTCTCAAATGGGGACCCTCCTCCCTCCACGAGACAAGGTGCTCCTCTATGGTCAAGGCAATGTCAAAGTTGTTTATATGGATGAAGATGACGTCGCCACATACACAATCAAGACAATTGATGATCCTCGAACATTGAACAAGACCGTATACCTGAGACCACCAGAAAACATTCTCACTCAAAGGCAGCTAACTGAGAAGTGGGAGAAACTCATAGGAAAAAAACTAGAGAAGTCCAGCATATGTGAACAAGACTTTCTTGCTTCCATGAAAGGTTTGGACTATGCAAGCCAAGTGGGAGTGGGGCATTTCTATCATATTTTCTATGAAGGGTGTTTGACAAACTTTGAAATAGGAGAAGGTGGAGAAGAAGCGTCGGAGCTTTATCCGGAGGTCAAATACACGCGCATGGATCAATACCTAAAAATGTATGTGTGA 1017 0.472 MTGLYIDGLSRSILRESNQPAARGEAMEKSKVLVVGGTGYVGRRIVKASLEQGHETYVLQRPEIGLDIEKVQMLLSFKKQGARLVEASVSDHHSLLDAVKLVDVVICTMSGVHFRSHNLLMQLKLVEAIKAAGNVKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEDANIPFTYISANCFAGYFAGNLSQMGTLLPPRDKVLLYGQGNVKVVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTQRQLTEKWEKLIGKKLEKSSICEQDFLASMKGLDYASQVGVGHFYHIFYEGCLTNFEIGEGGEEASELYPEVKYTRMDQYLKMYV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2021 338 Gene3D - 30 323 - -
Ssu2g2021 338 Pfam NmrA-like family 32 327 IPR008030 -
Ssu2g2021 338 PANTHER BIFUNCTIONAL PINORESINOL-LARICIRESINOL REDUCTASE-LIKE 28 336 - -
Ssu2g2021 338 Gene3D - 184 334 - -
Ssu2g2021 338 CDD PCBER_SDR_a 31 333 IPR045312 GO:0016491
Ssu2g2021 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 284 IPR036291 -
Ssu2g2021 338 PANTHER PINORESINOL REDUCTASE-RELATED 28 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2021 Ssu-Chr2 73533756 73537463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2021 K21568 - gmx:100775382 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2021 2 73533756 73537463 Ssu2g2021 2 73533756 73537463 ECH