Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2014 ATGGCAACCCTTGAAGACATTGGTGTTTCAGCTGCCATCAACATTCTCTCTGCCTTTGCCTTCTTGCTGGCTTTTGCTCTGCTGAGAATCCAACCCATCAATGACAGGGTCTACTTTCCAAAGTGGTATATCAGTGGGGGTAGAAGCACTCCAAGGAGGTCTGGGAATTTTGTGGGGAAGTTTGTGAACCTCAATTTCAGGACTTACCTGACCTTCCTCAACTGGATGCCACAGGCTCTCGGAATGAGTGAGTCTGAGATTATTAGCCATGCTGGCCTTGACTCTGCTGCTTTCCTCAGAATCTATACTCTGGGCTTAAAGATTTTTGTTCCAATCACAGTTGTGGCACTCCTCATTCTTATACCAGTCAACGTATCAAGTGGGacattatttttcctaaaaagaGAATTGGTAGTGAGTGATATTGATAAACTCTCTATATCAAATGTTCCACCTAAATCTATAAGattttttgtTCACATAGCATTGGAATACCTGTTCACAATATGGACTTGTTTTCTGCTTTACAAAGAATATGGCAATATGGCATCAATGAGATTGCATTTCTTGGCATCGCAGCGCAGGCGTGTGGAGCAATTCACAGTAGTTGTCAGGAATATCCCTCATATTTCTGGTCACTCAGTATCAGATACTGTGGATAGCTTCTTTCAAACAAACCACCCAGAACATTATATTGGACACCAGGCTGTCTACAATGCAAACAGATTTGCTAAATTTGCGAAAAGAAGGGATAGATTCCAAAATTGGCTGGACTATTACCAGCTTAAGTTCGAGAGACATCCTGACAAGAGGCCAACTGTCAAGAGAGGATTTTTAGGTCTCTGGGGTGGGAAAGTTGATGCTATTGAGTACTACAAACATTCAATTAAGGAACTTGATAAGATGATGACATTGGAACGccagaaaattataaaagatccCAAAGCTATTTTGCCAGTTGCTTTTCTTTCATTCAATTCCCGATGGGGAGCATCAGTTTGTGCGCAAACCCAACAAAGCAAGAATCCAACACTCTGGCTGACTGATTGGGCTCCAGAGCCACGTGATATATATTGGCAGAACTTGGCCATACCTTTTGTTTCTTTAAGCATCCGCAAACTTATAATATCATTGTCTGTGTTTGCCTTGGTATTCTTCTACATGATTCCCATTGCTTTTGTGCAATCCCTTGCCAATTTGGAGGGTCTTGAAAGAGTTGCTCCTTTCCTCAGACCAGTAATAGAATTGAAATTCATCAAGTCCTTTCTACAAGGTTTTCTTCCTGGTTTggcccttaaaatatttttgtacattCTACCCACAGTTCTGATGATCATGTCAAAAATTGAGGGATATATTGCATTGTCAATACTTGAGCGGAAGACAGctgcaaaatattattactttatgCTGGTGAATGTTTTCTTGGGAAGCATAGTGACTGGGACTGCATTTGAGCAACTGCATGCTTTCCTTCACCAGTCACCTACACAGATTCCTAGAACGATTGGAGTTTCCATTCCAATGAAGGCTACCTTCTTTATGACATACATAATGGTTGATGGCTGGGCTGGAATTGCTGGTGAGATTCTCAGATTAAAGGCATTGGTTATATACCATCTCAAGAACATGTTCATAGTTAAAACAGAACGAGATAGAGGAAAGGCCATGGACCCTGGGAGTGTGGACTTTCCAGAGACTCTTCCAAGTCTTCAACTATACTTCCTTCTTGGAACTGTGTATGCTGTGGTGACACCAATCCTTCTTCCCTTCATACTAGTCTTCTTTGCCTTTGCATATTTGGTTTACCGTCATCAGATAATCAATGTCTACAACCAACAGTATGAAAGTGCTGCTGCATTTTGGCCACATGTTCACAGCCGCATTATCGCAAGCTTGCTAATATCCCAGTTTCTTCTGCTGGGTCTGCTTAGCACCAAAAAGGCAGCTAAATCTACACCTTTGCTTGTTATCTTACCAATATTGACATTTGCATTCCACAAGTACTGCCAGAGACGTTTTGAGCCAGCATTTAGGAAGTACCCGCTTGAGGAAGCAATGGCAAAGGATTTATTGGAGAAAAGCACAGAACCTGACCTGAACATAAGGGCTTATTTGGCTGATGCTTACTTGCATCCAATCTTCCGGTCATTTGAGGTAGAAGAGGAATTGGTTGAAGTGAGAGTAGATAAACACCAAACTAATGTAGCTATTTCCCCATCAAGTGAGCCTAGTTCACCCTCCCCACCCCATCATGTCCATCAACCCTCCCCACCTCAATATAGTGACTATCCAACTTCACCACCAGGTTATTACTACCAATACCAACCTCCCTCCCCTCCCCATTATGTTTATCACAATTATCAGCATCAAGTTGAGCCTTGA 2385 0.4088 MATLEDIGVSAAINILSAFAFLLAFALLRIQPINDRVYFPKWYISGGRSTPRRSGNFVGKFVNLNFRTYLTFLNWMPQALGMSESEIISHAGLDSAAFLRIYTLGLKIFVPITVVALLILIPVNVSSGTLFFLKRELVVSDIDKLSISNVPPKSIRFFVHIALEYLFTIWTCFLLYKEYGNMASMRLHFLASQRRRVEQFTVVVRNIPHISGHSVSDTVDSFFQTNHPEHYIGHQAVYNANRFAKFAKRRDRFQNWLDYYQLKFERHPDKRPTVKRGFLGLWGGKVDAIEYYKHSIKELDKMMTLERQKIIKDPKAILPVAFLSFNSRWGASVCAQTQQSKNPTLWLTDWAPEPRDIYWQNLAIPFVSLSIRKLIISLSVFALVFFYMIPIAFVQSLANLEGLERVAPFLRPVIELKFIKSFLQGFLPGLALKIFLYILPTVLMIMSKIEGYIALSILERKTAAKYYYFMLVNVFLGSIVTGTAFEQLHAFLHQSPTQIPRTIGVSIPMKATFFMTYIMVDGWAGIAGEILRLKALVIYHLKNMFIVKTERDRGKAMDPGSVDFPETLPSLQLYFLLGTVYAVVTPILLPFILVFFAFAYLVYRHQIINVYNQQYESAAAFWPHVHSRIIASLLISQFLLLGLLSTKKAAKSTPLLVILPILTFAFHKYCQRRFEPAFRKYPLEEAMAKDLLEKSTEPDLNIRAYLADAYLHPIFRSFEVEEELVEVRVDKHQTNVAISPSSEPSSPSPPHHVHQPSPPQYSDYPTSPPGYYYQYQPPSPPHYVYHNYQHQVEP 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2014 794 MobiDBLite consensus disorder prediction 736 794 - -
Ssu2g2014 794 Pfam Late exocytosis, associated with Golgi transport 7 178 IPR032880 -
Ssu2g2014 794 Pfam Cytosolic domain of 10TM putative phosphate transporter 199 361 IPR027815 -
Ssu2g2014 794 PANTHER TO DEHYDRATION PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 740 - -
Ssu2g2014 794 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 740 IPR045122 GO:0005227
Ssu2g2014 794 Pfam Calcium-dependent channel, 7TM region, putative phosphate 372 644 IPR003864 GO:0016020
Ssu2g2014 794 MobiDBLite consensus disorder prediction 743 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2014 Ssu-Chr2 73478810 73486763 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2014 K21989 - gmx:100820282 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2014 2 73478810 73486763 Ssu2g2014 2 73478810 73486763 ECH