Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1952 ATGATGCATTTGGATGATGCCGAAATGCCTCCCCTGAGCTTCATTACGCAAATAGCTCGGGACTTGGGGCGCGTCATGAGGCTGAACctgtttaattttgatgttattaGGGATTCTCAGTGTGGGAATCGGTACCTTATTGTTGATATTAATTACTTCCCCGGGTATGCGAAGATGCCGGGTTATGAAACTGTTTTGACAGACTTTTTCTGTGATGTGTTGCGCAAGAAACAGCAAGTGGGTGAGGAGGGTTCTGAGAATGCTGGTTTTGATAGCGTGGTGGTGCATGGTTGTGACAACGATGCGAGAAGGATTATGAGCAATACttgttgtggtggtgatggGGATGGGGGTGTCCTTCAAGTTTCGCCTCTCGGCgtggaagagaaagagagttcTGTTcaagtatga 411 0.4063 MMHLDDAEMPPLSFITQIARDLGRVMRLNLFNFDVIRDSQCGNRYLIVDINYFPGYAKMPGYETVLTDFFCDVLRKKQQVGEEGSENAGFDSVVVHGCDNDARRIMSNTCCGGDGDGGVLQVSPLGVEEKESSVQV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1952 136 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3 90 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Ssu2g1952 136 Gene3D - 2 57 - -
Ssu2g1952 136 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 3 71 IPR040464 -
Ssu2g1952 136 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1952 Ssu-Chr2 72097863 72098273 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1952 K00913 - gmx:100794373 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1952 2 72097863 72098273 Ssu2g1952 2 72097863 72098273 ECH