Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1947 ATGAGAGCTTCTCTCATCCGAACCGGCTCGGTGCCGGTCCTCGCCGGTTCACCTCGAGTCTCTCTCACGCGCCAGGCCTCCTTCGCCGGCGACGTGAACCACGCTCATTCGTCCAGGCTTTCAATGCATTATTCCCACTCCAACGCCCGCCGGGACGCGCCGCCCAACGGGATCAACGGAGCCTCGTCGAAACGCGCCGCCGATAATTTCGGCCTTCGCTGGAATCTGAATCGAACCGGATCGCGCTCGTTCACGCCGGACGAAGAAGAATTCCTCTCCGACGCCGCTCTGCGCAGGCCGAGCCGCGTCGGAATCCGATCGGAGGATGTGGAATTCGGTGGCGGAGACGGCGGAGATCGCGGCAGCGCGACTGTCACCGGCGGAAACGGCGGTGAGAGGATGAAAATAGGCGCGTACTACGAGGAAATGCTGAAGTCGAACCCGACGGACGCGCTTCTGCTGCGAAACTACGGCAAATTTCTTCACGAGGTGGAGAAAGACACGGCGAGAGCAGAGGAATATTACGGAAGAGCTATTCTCGCGAACCCTGACGATGGCGAATTGTTTTCGCTGTACGGAACGCTGATTTGGGAAGCGCAGAGAGACGAAGAGAGAGCCAAATCTTACTTCGATCAAGCGATTCACGCCGCTCCTGATGATTgTACGGTGCTGGGATCCTATGCGCACTTCATGTGGGAAGCGGAGGAGGAaggggaagaggaagaggaagttaACGGAGGAGTGACGGAGGAAACGGTGACGGAGATGATCGCTGCTTTTTAA 783 0.567 MRASLIRTGSVPVLAGSPRVSLTRQASFAGDVNHAHSSRLSMHYSHSNARRDAPPNGINGASSKRAADNFGLRWNLNRTGSRSFTPDEEEFLSDAALRRPSRVGIRSEDVEFGGGDGGDRGSATVTGGNGGERMKIGAYYEEMLKSNPTDALLLRNYGKFLHEVEKDTARAEEYYGRAILANPDDGELFSLYGTLIWEAQRDEERAKSYFDQAIHAAPDDCTVLGSYAHFMWEAEEEGEEEEEVNGGVTEETVTEMIAAF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1947 260 Gene3D Tetratricopeptide repeat domain 121 243 IPR011990 GO:0005515
Ssu2g1947 260 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 244 - -
Ssu2g1947 260 MobiDBLite consensus disorder prediction 44 64 - -
Ssu2g1947 260 SUPERFAMILY TPR-like 138 235 IPR011990 GO:0005515
Ssu2g1947 260 MobiDBLite consensus disorder prediction 107 128 - -
Ssu2g1947 260 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1947 Ssu-Chr2 72030090 72031082 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1947 - - gmx:100788211 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1947 2 72030090 72031082 Ssu2g1947 2 72030090 72031082 ECH