Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1941 ATGGCAATGAGCAACAATGTGATCGGAGCCATCAACCTGGTGGCTGTGATCCTCTCAATCCCAATCATCGGTGCCGGAATCTGGCTAACAAACGAGCAAGCCGATTCCTGTGTCCAGTTTCTACAATGGCCCGTCATCATCCTCGGGGTTCTCATCTTGGTCGTGGCTCTCGCAGGTTTCATCGGAGCCTTTTGGAGAATCTCGTGGCTCCTCATTTTCTACCTCATCGCCATGCTCGCGCTCGTAATACTGCTGGTGTGTTTGGTGGTCTTTGTTTATATGGTCACCCTTCGAGGTCACGGCAACATTGAACCCAACCGGGCTTACTTGGAATACCGTATGGATGACTTCTCAGGCTACCTTCGTCGAAGGGTAAGAAGCTCGTTCAAGTGGGATCGCATCAGAAGTTGTCTTAGCCAAACAAACATGTGTGCTGAGCTCAACCAAAGTTACCGAATGGCTCAGGACTTCTTTAACGCACGTCTAACGCCCATGCAGTCAGGGTGCTGCAAGCCACCGACGCAATGTGCGTACACATTTGTGAACCCAACCTATTGGATCAGCCCAATCAACACTGCAGCGGATATGGATTGCTTGCAGTGGAGCAACGACCAAACACAACTTTGCTACAACTGTGACTCGTGCAAGGCCGGTTTATTGGCAAATCTTAGGAAGGAGTGGAAAAGGGCTAATGTGATATTAATCATCACAGTCATTGTTTTAATAGTGGTGTATTTGATAGGGTGCTGTGCCTTTAGGAATGCCAAAACTGAGGACCTTTTCCGCAAATACAAACAAGGCTATACTTGA 810 0.484 MAMSNNVIGAINLVAVILSIPIIGAGIWLTNEQADSCVQFLQWPVIILGVLILVVALAGFIGAFWRISWLLIFYLIAMLALVILLVCLVVFVYMVTLRGHGNIEPNRAYLEYRMDDFSGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQSYRMAQDFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPINTAADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWKRANVILIITVIVLIVVYLIGCCAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1941 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Ssu2g1941 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Ssu2g1941 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016021
Ssu2g1941 269 PRINTS Transmembrane four family signature 38 64 - -
Ssu2g1941 269 PRINTS Transmembrane four family signature 6 29 - -
Ssu2g1941 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1941 Ssu-Chr2 71929338 71931579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1941 1 269 Miscellaneous Gene Families AT5G46700 70.260 3.33e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1941 - - gmx:100795775 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1941 2 71929338 71931579 Ssu2g1941 2 71929338 71931579 ECH